Pairwise Alignments

Query, 458 a.a., permease from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., gluconate:H+ symporter (from data) from Klebsiella michiganensis M5al

 Score =  267 bits (682), Expect = 6e-76
 Identities = 153/433 (35%), Positives = 247/433 (57%), Gaps = 15/433 (3%)

Query: 14  LTVAAVAIIALLLLIIRFKIHAFASLTLVSLGTAIATGVASDKVVSTMMTGFGGTLASVA 73
           L + A+ +  LLLL+IRFK++ F +L LV+L   +  G+  DKV+ ++  G GGTL S+A
Sbjct: 3   LVIVAIGVALLLLLMIRFKLNGFIALVLVALAVGLMQGMPLDKVIVSIKNGVGGTLGSLA 62

Query: 74  LLVGLGAMIGKILEVTGGAKVLADTLIGRFGEQRAPFALGVASLLFGFPIFFDAGLIVMM 133
           L++G GAM+GK+L   GGA+ +A TLI +FG+Q   +A+ +     GF +F++ G ++M+
Sbjct: 63  LIMGFGAMLGKMLADCGGAQRIATTLIAKFGKQHIQWAVVLTGFTVGFALFYEVGFVLML 122

Query: 134 PIIFSVAKRFGGSPLKYALPSAGAFAVMHAFVPPHPGPVAAAELLGANIGLLLIVGLLVA 193
           P++F++A   G   L   +P A A +V H F+PPHPGP A A +  A++G  L+ G ++A
Sbjct: 123 PLVFTIAASAGIPLLYIGVPMAAALSVTHGFLPPHPGPTAIATIFHADMGKTLLFGTILA 182

Query: 194 IPTWYLGAYLFGLYAGKKFDIPLSKAFFNTDAIIDEAKLPKFATVMTILVLPVLLIFMDT 253
           IPT  L   ++  +  K  D P+ +   N     +E ++P F   +   ++PV+L+ M  
Sbjct: 183 IPTVILAGPVYARFL-KGIDKPIPEGLHNPKTFTEE-EMPGFGVSVWTSLVPVILMAM-- 238

Query: 254 GLNTLAVAGMIDGKAPA-VEFLRMLGKTPIALLITLLVCIAAFAKDYG--MARLEKLCGD 310
                AVA M+  K  A +      G   +A LI +L+ +  F  + G  M ++      
Sbjct: 239 ----RAVAEMVLPKGHAFLPIAEFFGDPVMATLIAVLIAMFTFGLNRGRSMEQINDTLTS 294

Query: 311 SLAPICAVILVTGAGGMFGGVLRASGIGSALAGVLSDTGMPVVVAAFVIATCLRVAQGSA 370
           S+  I  ++L+ G GG F  VL  SG+   +A ++ ++ M  +  A+ IA  LR+A GSA
Sbjct: 295 SIKIIAMMLLIIGGGGAFKQVLVDSGMDKYIASIMHESNMSPLFMAWSIAAVLRIALGSA 354

Query: 371 TVALTTTAALIAPTVAATTGLSDLDLCFIVISIAGGATVLSHFNDSGFWLVSRLMEMDEK 430
           TVA  T   + AP + ATTG+S      +VI++  G+ + SH ND GFWL      +   
Sbjct: 355 TVAAITAGGIAAPLI-ATTGVSPE---LMVIAVGSGSVIFSHVNDPGFWLFKEYFNLTIG 410

Query: 431 TTLKTWTVMETLL 443
            T+K+W+V+ET++
Sbjct: 411 ETIKSWSVLETII 423