Pairwise Alignments

Query, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  420 bits (1079), Expect = e-122
 Identities = 235/544 (43%), Positives = 335/544 (61%), Gaps = 4/544 (0%)

Query: 15  SLRHLSIRNRLFLLTVVILVLLAIPFAIMVKDYRHDLMLEKQVQTQHLVESAYTLLEHYA 74
           SLR +SI  RL+L+ VV +V+L    A+M+K    DL   K  +TQH+V++A  +L +Y 
Sbjct: 3   SLRSVSISRRLWLILVVSIVMLFTLGALMLKQIHSDLYQAKVQKTQHVVQTASGVLTYYQ 62

Query: 75  QQATQGTLTTEQAQNTAKQAIAQLRYGANDYFWINDAQPAMVMHPMKPDLNGKDLRSFKD 134
                GTLT + AQ  A  A+  LRY   DYFWIND  P M+MHP  P L G++L + +D
Sbjct: 63  GLEAAGTLTRDAAQKQALSAVRGLRYNQTDYFWINDLTPVMIMHPTNPKLEGQNLSAIRD 122

Query: 135 PNGKALFVEMVNVTQRNQQGVVEYQWPKPGAEQPVDKVSYVKLFKPWGWIIGTGIYVDDV 194
           PNG ALF EMV + +    G++ Y WPKPGAE PV K SYV+LF+PWGWIIG+G+YVDDV
Sbjct: 123 PNGYALFNEMVAIAKSKGAGMINYLWPKPGAEAPVGKTSYVQLFEPWGWIIGSGVYVDDV 182

Query: 195 NALVMQRLSSILVWVVGTLLVLI--VLASLIGRSITQPCEETLATLKNIAQGEGDLTRQL 252
            A    ++  I   VVG ++ L+  +L +LI RSI  P +ET+  + NIA GE DLTR L
Sbjct: 183 QAEFQSQV--IKASVVGLVITLLMGLLLTLIVRSIVGPLQETVNAMANIASGESDLTRTL 240

Query: 253 TVTGKDELAQIAQAFNLFTNKIRHIIQEITPITESVTGSADELTQVAQSASSKAYDQHQA 312
              G+DE+ Q+A+ FN FT K+R ++ ++     ++  S+ EL   A  A  ++  Q Q 
Sbjct: 241 DTHGQDEVTQLARHFNAFTAKLRQVVTQLQASASALGQSSSELGNDAAQAQERSQQQSQQ 300

Query: 313 VDTVASAMNQLHASNQEVAQSAHQAEQAAHSANQAASQGREMITLTSTQMQSLRDQLTRT 372
           ++ VA+A+N++    Q+VA++A  A      A   A QG+  I  +  Q+  L   + + 
Sbjct: 301 MELVATAINEVTYGVQDVAKNAEHAANEMRDAESQAQQGQVNIDGSLQQIDRLSQTIDQA 360

Query: 373 EQETQVLASETQSVSAVLEVIRGVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLA 432
            +  + LASE+  + +VLEVIR +AEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA
Sbjct: 361 VEVIRTLASESTQIGSVLEVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLA 420

Query: 433 TRTQASTNEIEQIIAQLQKKAQSVSQSMTQTQQQSRVTQQQAEQAQQMLNEIEAQIKTIL 492
            RTQ ST EI+ +I +LQ  +++  + +  + + S++T +QA  A   LN I   ++ + 
Sbjct: 421 QRTQKSTAEIQAMIERLQTHSEAAVKVIGDSSRASQLTIEQAGLAGASLNAIGQALRNLN 480

Query: 493 SFNQHIAGASAQQSEATDEITRNLTQIAEHSTQASAQANQVAAASEQLMENGQHLARSLA 552
           S N  IA A+ QQ+   ++I +N+TQ A  S   +  A Q + AS +L    + L   L 
Sbjct: 481 SLNASIASATLQQAHVVEDINQNVTQAAGLSHSTAMAAEQSSQASTRLKALSEQLNGLLT 540

Query: 553 VFKI 556
            F++
Sbjct: 541 QFRV 544