Pairwise Alignments

Query, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 612 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  219 bits (559), Expect = 2e-61
 Identities = 128/356 (35%), Positives = 202/356 (56%), Gaps = 1/356 (0%)

Query: 201 RLSSILVWVVGTLLVLIVLASL-IGRSITQPCEETLATLKNIAQGEGDLTRQLTVTGKDE 259
           R++ +   +VG L V+  L ++   +SI +P  +    L++IAQGEGDL R+L   G DE
Sbjct: 256 RMTYLTTLIVGGLTVIFALVAVAFSKSIVKPISQVSTGLQSIAQGEGDLRRELEFQGNDE 315

Query: 260 LAQIAQAFNLFTNKIRHIIQEITPITESVTGSADELTQVAQSASSKAYDQHQAVDTVASA 319
            A++A  FN F + IR +IQ I   + ++  ++   ++VA + +  A  Q +AV+ V++A
Sbjct: 316 TAELAGWFNKFLSAIRQLIQHIGAASSNLQNASRVNSEVANNMNEAAGRQREAVELVSTA 375

Query: 320 MNQLHASNQEVAQSAHQAEQAAHSANQAASQGREMITLTSTQMQSLRDQLTRTEQETQVL 379
            N++ A+  EVA+S   A ++A + ++  ++G++ I +T+  +  L  +LT + Q    L
Sbjct: 376 FNEMVATANEVARSCSGAAESAENGHRRVAEGKQQIEITTDNVNRLGRRLTESSQSMTEL 435

Query: 380 ASETQSVSAVLEVIRGVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLATRTQAST 439
            + ++S++ +L  IR +AEQTNLLALNAAIEAARAG+QGRGFAVVADEVR LA RT  ST
Sbjct: 436 EAGSRSINQILGTIRAIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRALAKRTSDST 495

Query: 440 NEIEQIIAQLQKKAQSVSQSMTQTQQQSRVTQQQAEQAQQMLNEIEAQIKTILSFNQHIA 499
            EIEQ++  L  K Q V   M    + S  +    E  +     I+  +  I   N  I+
Sbjct: 496 GEIEQLLGALGSKTQEVMGKMGSCLELSHASVSSIESTRDSFEGIQLSVNEIRDQNLQIS 555

Query: 500 GASAQQSEATDEITRNLTQIAEHSTQASAQANQVAAASEQLMENGQHLARSLAVFK 555
            A+ +Q    +EI R++ QI + +    + AN     S +L      L   +  FK
Sbjct: 556 AAAEEQHSVAEEINRHIQQIYDEARLVESLANSAQDDSGKLSSLSDELNGLVGRFK 611