Pairwise Alignments

Query, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2C3

 Score =  426 bits (1094), Expect = e-123
 Identities = 235/542 (43%), Positives = 334/542 (61%)

Query: 15  SLRHLSIRNRLFLLTVVILVLLAIPFAIMVKDYRHDLMLEKQVQTQHLVESAYTLLEHYA 74
           SLR +SI  RL+L+ +V +V+L    A M+K    DL   K  +TQH+V++A  +L +Y 
Sbjct: 3   SLRSVSISRRLWLILIVAIVMLFTLGAFMLKQIHTDLYQAKVQKTQHVVQTASGVLSYYH 62

Query: 75  QQATQGTLTTEQAQNTAKQAIAQLRYGANDYFWINDAQPAMVMHPMKPDLNGKDLRSFKD 134
              T GTLT E AQ  A  A+  LRY  +DYFWIND  P MVMHP  P L G++L + +D
Sbjct: 63  GLETAGTLTREAAQKQALSAVRGLRYDQSDYFWINDLTPVMVMHPTNPKLEGQNLSAIRD 122

Query: 135 PNGKALFVEMVNVTQRNQQGVVEYQWPKPGAEQPVDKVSYVKLFKPWGWIIGTGIYVDDV 194
           PNG ALF EMV + +    G+++Y WPKPGAE PV K SYVKLF+PWGWIIG+G+YVDDV
Sbjct: 123 PNGFALFNEMVAIAKAKGAGIIDYLWPKPGAEAPVGKTSYVKLFEPWGWIIGSGVYVDDV 182

Query: 195 NALVMQRLSSILVWVVGTLLVLIVLASLIGRSITQPCEETLATLKNIAQGEGDLTRQLTV 254
                 +L    +  +   LV+ +L +LI RSI +P +ET+  + NIA GE DLTR L  
Sbjct: 183 QTEFRSQLIKASLIGLAITLVMGLLLTLIVRSIVRPLQETVNAMANIASGESDLTRTLDT 242

Query: 255 TGKDELAQIAQAFNLFTNKIRHIIQEITPITESVTGSADELTQVAQSASSKAYDQHQAVD 314
            G+DE+ Q+A+ FN FT K+R ++ ++     ++  S+ EL   A  A  ++  Q Q ++
Sbjct: 243 HGQDEVTQLARHFNAFTAKLRQVVSQLQESASALGQSSSELGNDAAQAQERSQQQSQQME 302

Query: 315 TVASAMNQLHASNQEVAQSAHQAEQAAHSANQAASQGREMITLTSTQMQSLRDQLTRTEQ 374
            VA+A+N++    Q+VA++A  A      A   A QG+  I  +  Q+  L   + +  +
Sbjct: 303 LVATAINEVTYGVQDVAKNAEHAASEMRDAESQAQQGQVNIDGSLQQIDRLSQTIDQAVE 362

Query: 375 ETQVLASETQSVSAVLEVIRGVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLATR 434
             + LASE+  + +VLEVIR +AEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA R
Sbjct: 363 VIRTLASESTQIGSVLEVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQR 422

Query: 435 TQASTNEIEQIIAQLQKKAQSVSQSMTQTQQQSRVTQQQAEQAQQMLNEIEAQIKTILSF 494
           TQ ST EI+ +I +LQ  +++  + +  + + S++T +QA  A   LN I   ++ + S 
Sbjct: 423 TQKSTAEIQAMIERLQTHSEAAVKVIGDSSRASQLTIEQAGLAGASLNAIGQALRNLNSL 482

Query: 495 NQHIAGASAQQSEATDEITRNLTQIAEHSTQASAQANQVAAASEQLMENGQHLARSLAVF 554
           N  IA A+ QQ+   ++I +N+TQ A  S   +  A Q + AS +L    + L   L  F
Sbjct: 483 NASIASATLQQAHVVEDINQNVTQAAGLSHSTAMAAEQSSQASSRLKALSEQLNGLLKQF 542

Query: 555 KI 556
           ++
Sbjct: 543 RV 544