Pairwise Alignments

Query, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  235 bits (599), Expect = 4e-66
 Identities = 136/352 (38%), Positives = 208/352 (59%), Gaps = 2/352 (0%)

Query: 205 ILVWVVGTLLVLIVLASLIGRSITQPCEETLATLKNIAQGEGDLTRQLTVTGKDELAQIA 264
           ++V ++   +  I+LA L+ RSI QP  E +   + IA G  DLTR   V G DE A++ 
Sbjct: 190 VVVAMILAFIATIILAMLLTRSIVQPLAEAVGVAEVIAGG--DLTRHFQVVGSDEPARLL 247

Query: 265 QAFNLFTNKIRHIIQEITPITESVTGSADELTQVAQSASSKAYDQHQAVDTVASAMNQLH 324
            A       +R  IQ I+  +  +  +A+EL  V + ++   + Q+  ++  A+A+N++ 
Sbjct: 248 SALQAMQRSLRETIQGISDSSNQLASAAEELNVVTEDSTRGLHQQNHEIEQAATAVNEMT 307

Query: 325 ASNQEVAQSAHQAEQAAHSANQAASQGREMITLTSTQMQSLRDQLTRTEQETQVLASETQ 384
           A+  EVA++A    +A+  +++ A  GR+ +  T   +  L D +T+T  E + LA + +
Sbjct: 308 AAVDEVARNAVATSEASRESDETAQHGRQQVIRTVDSIGLLADDVTQTATEVERLAGQVR 367

Query: 385 SVSAVLEVIRGVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLATRTQASTNEIEQ 444
            +S VL+VIR +AEQTNLLALNAAIEAARAG+ GRGFAVVADEVR LA RTQ ST EIEQ
Sbjct: 368 DISKVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALAHRTQQSTQEIEQ 427

Query: 445 IIAQLQKKAQSVSQSMTQTQQQSRVTQQQAEQAQQMLNEIEAQIKTILSFNQHIAGASAQ 504
           +I  + +       +M  + +++R T + A  A + L+ I + I  I   N  IA AS +
Sbjct: 428 MIGDVHQGTDKAVHAMQLSNERARTTLELARAAGEALDGIASAISQISERNLVIASASEE 487

Query: 505 QSEATDEITRNLTQIAEHSTQASAQANQVAAASEQLMENGQHLARSLAVFKI 556
           Q++   E+ RNL  I + S Q+SA ANQ +AAS++L      L   +A F++
Sbjct: 488 QAQVAREVDRNLVNIRDLSLQSSAGANQTSAASQELARLAIDLNNLVARFQV 539