Pairwise Alignments

Query, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  228 bits (580), Expect = 6e-64
 Identities = 134/352 (38%), Positives = 208/352 (59%), Gaps = 5/352 (1%)

Query: 205 ILVWVVGTLLVLIVLASLIGRSITQPCEETLATLKNIAQGEGDLTRQLTVTGKDELAQIA 264
           +L+ V+G +++ + +  +I R I         T+  +A+ E DL+R + +  KDE+  + 
Sbjct: 193 LLLLVIGVVVMCMTVRHVIIRRINAMRH----TMNAMAEDE-DLSRSVAIGAKDEIGAMG 247

Query: 265 QAFNLFTNKIRHIIQEITPITESVTGSADELTQVAQSASSKAYDQHQAVDTVASAMNQLH 324
            AFN    K RH ++ +  +T  +T  ++ ++ VA+   +   +Q    D VASAMN++ 
Sbjct: 248 DAFNRMIGKFRHSLEAVAGVTHQLTDVSERVSHVAEKTLAAVNEQRSETDMVASAMNEMS 307

Query: 325 ASNQEVAQSAHQAEQAAHSANQAASQGREMITLTSTQMQSLRDQLTRTEQETQVLASETQ 384
           A+ QEVA++A+Q   A+  A+  +  G ++ T     ++ L  ++ +  Q  Q + S++ 
Sbjct: 308 ATVQEVARNANQTATASAGADTESKAGVKVATEALDGIEVLIAEIEKAAQVIQRVESDSA 367

Query: 385 SVSAVLEVIRGVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLATRTQASTNEIEQ 444
           S+  VL VI G+AEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLA+RTQ ST EI+ 
Sbjct: 368 SIDMVLGVINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQKSTEEIQA 427

Query: 445 IIAQLQKKAQSVSQSMTQTQQQSRVTQQQAEQAQQMLNEIEAQIKTILSFNQHIAGASAQ 504
           +I QLQ   ++  Q+M + Q ++R   Q  E+A Q L  I  ++ TI   N  IA A+ Q
Sbjct: 428 MIEQLQSGVRNAVQAMKEAQLRARSGSQCVEKAAQSLGLIATEVGTINEMNTQIATAAEQ 487

Query: 505 QSEATDEITRNLTQIAEHSTQASAQANQVAAASEQLMENGQHLARSLAVFKI 556
           QS   +EI RN++ I+  +   S  A Q +  S++L+     L R +  FK+
Sbjct: 488 QSAVAEEINRNISTISRIADTTSTDATQTSEISDELVRLATELNRLVGQFKL 539