Pairwise Alignments

Query, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  226 bits (575), Expect = 2e-63
 Identities = 134/371 (36%), Positives = 212/371 (57%), Gaps = 6/371 (1%)

Query: 189 IYVDDVNALVMQRL-SSILVWVVGTLLVLIVLASLIG----RSITQPCEETLATLKNIAQ 243
           I++ D+    ++ L SS L W +G  +  +++ S  G    R +  P  E    L+ I +
Sbjct: 170 IHIADLEREQVETLHSSSLKWFIGLAVFAVLITSFFGVWVNRGVMTPVTEIRQKLRQIRE 229

Query: 244 GEGDLTRQLTVTGKDELAQIAQAFNLFTNKIRHIIQEITPITESVTGSADELTQVAQSAS 303
            + D+T   TV   DEL  IA+  N   N ++ I++ I     ++  SADEL +  + A+
Sbjct: 230 -KSDMTVSFTVFRDDELGHIAKDLNGVVNHLKGILKNIAEAASTLGDSADELNEFTRQAN 288

Query: 304 SKAYDQHQAVDTVASAMNQLHASNQEVAQSAHQAEQAAHSANQAASQGREMITLTSTQMQ 363
            + + Q    +  A+AMN++ A+  EVAQS++ A ++A +A+++A++G  ++  + + M 
Sbjct: 289 DRMFKQQSETEQTATAMNEMTAAVAEVAQSSNSAAESARNADESAARGNSIVQQSISSMS 348

Query: 364 SLRDQLTRTEQETQVLASETQSVSAVLEVIRGVAEQTNLLALNAAIEAARAGEQGRGFAV 423
            L  Q+  T      LA+E+Q++  VL+VI+ +AEQTNLLALNAAIEAARAGEQGRGFAV
Sbjct: 349 VLASQIQGTAAVIGELATESQNIGRVLDVIKSIAEQTNLLALNAAIEAARAGEQGRGFAV 408

Query: 424 VADEVRTLATRTQASTNEIEQIIAQLQKKAQSVSQSMTQTQQQSRVTQQQAEQAQQMLNE 483
           VADEVRTLA RT  ST EIE +I  LQ+  +S   SM Q   Q     +    A   L +
Sbjct: 409 VADEVRTLAQRTSESTREIESMIESLQQGVKSAVNSMEQGIAQVDNANESTNAAGSALQD 468

Query: 484 IEAQIKTILSFNQHIAGASAQQSEATDEITRNLTQIAEHSTQASAQANQVAAASEQLMEN 543
           I A + +I   N HIA A+ +QS   + I +++  I++ + +++  AN ++ A  QL + 
Sbjct: 469 IVASVDSITQLNTHIATAADEQSCVAESINQSIIAISDIAQESTQAANDLSEAVHQLAQL 528

Query: 544 GQHLARSLAVF 554
             H+   +  F
Sbjct: 529 AGHMRTQVGTF 539