Pairwise Alignments

Query, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25-INTG

 Score =  252 bits (644), Expect = 3e-71
 Identities = 141/360 (39%), Positives = 224/360 (62%), Gaps = 3/360 (0%)

Query: 200 QRLSSILVWVVGTLLVL---IVLASLIGRSITQPCEETLATLKNIAQGEGDLTRQLTVTG 256
           QR + I+   +  LL+    +++  L+G  I +P ++ +A L +IAQGEGDLTR+LT   
Sbjct: 353 QRKADIVGMAIAGLLIAGIGLLVIWLVGHGIARPLKQMVAMLNDIAQGEGDLTRRLTSDR 412

Query: 257 KDELAQIAQAFNLFTNKIRHIIQEITPITESVTGSADELTQVAQSASSKAYDQHQAVDTV 316
            DEL  IA  FN F  K++ +I ++    + V+ S++    +A   +   + Q   +D V
Sbjct: 413 ADELGAIANGFNTFLIKLQGMITQVVSSVQKVSDSSEHTADIAIRTNQGVHKQMVEIDQV 472

Query: 317 ASAMNQLHASNQEVAQSAHQAEQAAHSANQAASQGREMITLTSTQMQSLRDQLTRTEQET 376
           A+A++++ A+ Q+VA++A QA QAA  A+QAASQG  ++  TST + +L +++ +     
Sbjct: 473 ATAVHEMTATAQDVARNATQAAQAASHADQAASQGMRIVRDTSTSIGALAEEIGKAVGVV 532

Query: 377 QVLASETQSVSAVLEVIRGVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLATRTQ 436
           Q LA ++++++A+L  IRG+AEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA +TQ
Sbjct: 533 QTLAKDSENINAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQ 592

Query: 437 ASTNEIEQIIAQLQKKAQSVSQSMTQTQQQSRVTQQQAEQAQQMLNEIEAQIKTILSFNQ 496
            +T EI+ +I QLQ+  + V + M  +Q ++  + Q A +A + L  I   +  I   N 
Sbjct: 593 KATEEIQAMIQQLQQGTRDVVRVMEDSQSRTDESVQHAAKAAEALETISQAVSVINDMNT 652

Query: 497 HIAGASAQQSEATDEITRNLTQIAEHSTQASAQANQVAAASEQLMENGQHLARSLAVFKI 556
            IA A+ +QS   ++I RN+  I + + + +  A++ +AAS  L +  +   R +  FK+
Sbjct: 653 QIASAAEEQSAVAEDINRNVINIGQVANEVAGGADESSAASADLTKLAEQQRRLINQFKV 712