Pairwise Alignments

Query, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  252 bits (644), Expect = 3e-71
 Identities = 143/374 (38%), Positives = 223/374 (59%)

Query: 183 WIIGTGIYVDDVNALVMQRLSSILVWVVGTLLVLIVLASLIGRSITQPCEETLATLKNIA 242
           W +   +   +V AL+ +    ILVW V      I L++ +  S++QP  +    L++I 
Sbjct: 265 WYLVAQVPRAEVFALLEESAYQILVWTVLIAAAFIGLSTFVSASVSQPIAKVADMLQDIG 324

Query: 243 QGEGDLTRQLTVTGKDELAQIAQAFNLFTNKIRHIIQEITPITESVTGSADELTQVAQSA 302
           QGEGDL ++L V G DELAQ+A+ FN F  KI+H I E+T  +  ++ +A ++   AQ  
Sbjct: 325 QGEGDLRQRLPVEGNDELAQLAKGFNSFIEKIQHSIIEVTDTSVQLSHAAKDVANQAQQT 384

Query: 303 SSKAYDQHQAVDTVASAMNQLHASNQEVAQSAHQAEQAAHSANQAASQGREMITLTSTQM 362
              +  Q      V +A+N++ A+  E+A +A QA   A  A+ A+S G+ ++T     +
Sbjct: 385 QDDSQLQKDQTMMVVTAINEMGATVHEIAGNAAQAADNAKDADNASSNGQIVVTRARDTI 444

Query: 363 QSLRDQLTRTEQETQVLASETQSVSAVLEVIRGVAEQTNLLALNAAIEAARAGEQGRGFA 422
             L   + +     + LA+ T S+ ++L+VIR V++QTNLLALNAAIEAARAGE GRGFA
Sbjct: 445 NQLSQDVEQVGNVIESLATHTTSIGSILDVIRAVSDQTNLLALNAAIEAARAGEAGRGFA 504

Query: 423 VVADEVRTLATRTQASTNEIEQIIAQLQKKAQSVSQSMTQTQQQSRVTQQQAEQAQQMLN 482
           VVA+EVR LA+RT AST+E++++I  LQ +A    ++MTQ++ +S+   Q  ++A   L 
Sbjct: 505 VVAEEVRNLASRTAASTDEVQKMIDNLQSEAARAVEAMTQSKSRSQEGVQAVDEASHTLT 564

Query: 483 EIEAQIKTILSFNQHIAGASAQQSEATDEITRNLTQIAEHSTQASAQANQVAAASEQLME 542
           EI  QI  I   N  +A A+ +QS   ++I RN+T+I+E + + S  +  VA AS+ L +
Sbjct: 565 EISQQIGAITDMNIQVAAATEEQSTVVEDINRNVTEISEITQRTSETSQAVAQASQSLNQ 624

Query: 543 NGQHLARSLAVFKI 556
               L   +A FK+
Sbjct: 625 LAHRLDTLVAGFKV 638