Pairwise Alignments

Query, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., methyl-accepting chemotaxis protein from Dechlorosoma suillum PS

 Score =  323 bits (829), Expect = 8e-93
 Identities = 189/542 (34%), Positives = 303/542 (55%), Gaps = 9/542 (1%)

Query: 19  LSIRNRLFLLTVVILVLLAIPFAIMVKDYRHDLMLEKQVQTQHLVESAYTLLEHYAQQAT 78
           +SIR +   LT + ++ L + FA+++   +  LM ++Q + ++LVE A+ L+ HY +Q  
Sbjct: 7   VSIRTKFLWLTGITVLSLVVLFAVVLATEKSLLMQDRQEKVRNLVEVAHGLVAHYDKQVQ 66

Query: 79  QGTLTTEQAQNTAKQAIAQLRYGANDYFWINDAQPAMVMHPMKPDLNGKDLRSFKDPNGK 138
            G L+ E+AQ  A  AI  LRY   +YFWIND    MVMHP+KP+++GK L   KD  GK
Sbjct: 67  AGKLSKEEAQQAAIAAIKDLRYDKIEYFWINDLNDLMVMHPIKPEMDGKKLDQLKDKAGK 126

Query: 139 ALFVEMVNVTQRNQQGVVEYQWPKPGAEQPVDKVSYVKLFKPWGWIIGTGIYVDDVNALV 198
            LF E     ++   G V+Y WPKPG E PV K+SYVK ++PWGW+IG+GIY DDVNA+ 
Sbjct: 127 YLFREFNETVKKQGAGFVDYLWPKPGFEDPVPKISYVKGYEPWGWVIGSGIYTDDVNAIF 186

Query: 199 MQRLSSILVWVVGTLLVLIVLASLIGRSIT-----QPCEETLATLKNIAQGEGDLTRQLT 253
            Q     L+W +    ++ V   L+ RS+      +P E T+ T K IA   GDLT  + 
Sbjct: 187 KQEAIKFLIWGLAIGGLISVSLFLVRRSLLRILGGEPHEATVIT-KRIA--AGDLTVDIR 243

Query: 254 VTGKDELAQIAQAFNLFTNKIRHIIQEITPITESVTGSADELTQVAQSASSKAYDQHQAV 313
               D  + IA +       +R +I  I    E ++ +A +L + ++  +  A +Q ++ 
Sbjct: 244 TEAGDSTSLIA-SMKEMQETLRSMIGSIVGGAEQLSTAAAQLMRASEEVTGSAREQSESA 302

Query: 314 DTVASAMNQLHASNQEVAQSAHQAEQAAHSANQAASQGREMITLTSTQMQSLRDQLTRTE 373
            ++A+AM ++  S  +VA++A +A   +  +   + QG  +I   + +M+ + + +  + 
Sbjct: 303 ASMAAAMQEMTVSIDQVAENAREAHAISTQSGDYSQQGTVVIHNAAQEMRQIAEAVQASS 362

Query: 374 QETQVLASETQSVSAVLEVIRGVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAT 433
              + L  ++  +++++  I+ +A+QTNLLALNAAIEAARAGEQGRGFAVVADEVR LA 
Sbjct: 363 SIIEELGRQSDQITSIVNTIKEIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAE 422

Query: 434 RTQASTNEIEQIIAQLQKKAQSVSQSMTQTQQQSRVTQQQAEQAQQMLNEIEAQIKTILS 493
           RT  ST EI   I+++Q   ++   SM     Q     + A +A + +N I    + +  
Sbjct: 423 RTSLSTQEIADTISKIQAGTRNAVASMELGVNQVDKGVELANEAGESINNIRDGAQRVTQ 482

Query: 494 FNQHIAGASAQQSEATDEITRNLTQIAEHSTQASAQANQVAAASEQLMENGQHLARSLAV 553
               I  +  +QS  + ++ +++ +IA  S  ++      A A+  L E    L  S++ 
Sbjct: 483 VVNDITNSIKEQSTTSSDMAQSIERIARMSEDSANAIAHTAEAARHLQELSLELHGSVSR 542

Query: 554 FK 555
           FK
Sbjct: 543 FK 544