Pairwise Alignments

Query, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 549 a.a., methyl-accepting chemotaxis protein from Dechlorosoma suillum PS

 Score =  259 bits (662), Expect = 2e-73
 Identities = 168/540 (31%), Positives = 277/540 (51%), Gaps = 13/540 (2%)

Query: 18  HLSIRNRLFLLTVVILVLLAIPFAIMVKDYRHDLMLEKQVQTQHLVESAYTLLEHYAQQA 77
           +L +++R+F+L  + +  +     +       DL    Q   +  VE+AY ++  Y    
Sbjct: 4   NLRLKSRMFILIALAVFGMGTITILGALGVSRDLHEGHQQTVRAAVEAAYNIIAGYQALE 63

Query: 78  TQGTLTTEQAQNTAKQAIAQLRYGAND----YFWINDAQPAMVMHPMKPDLNGKDLRS-F 132
             G ++  +AQ  A +++   RYG  D    YF I   +   VMHP++P+  GKD+    
Sbjct: 64  KAGKMSRSEAQKAAVESVRMARYGGTDGRSEYFHIWTPEGVTVMHPIRPEWEGKDVTGEV 123

Query: 133 KDPNGKALFVEMVNVTQRNQQGV-VEYQWPKPG--AEQPVDKVSYVKLFKPWGWIIGTGI 189
           +D  G+     +++   +   G  VE  +P PG  AE+ VDK+ YVKLF PWGW++G+GI
Sbjct: 124 RDVKGRPTLRNIIDGAIKQPDGAFVETLFPHPGQPAEKAVDKLQYVKLFAPWGWVVGSGI 183

Query: 190 YVDDVNALVMQRLSSILVWVVGTLLVLIVLASLIGRSITQPC--EETLATLKNIAQGEGD 247
           Y+DDV A V QR     +  +  L ++     L+GRS+ Q    E  +A        +GD
Sbjct: 184 YLDDVQAEVRQRTLEDSLMALVLLALVAAGTYLVGRSVLQQVGGEPGVAIDLMRQAADGD 243

Query: 248 LTRQLTVTGKDELAQIAQAFNLFTNKIRHIIQEITPITESVTGSADELTQVAQSASSKAY 307
           LT ++          +  +F+     +R +++EI   +  +T +A+ ++  A+  S    
Sbjct: 244 LTVRVETA---PAGSMLASFSHMVASLRQVVKEIGSNSSQLTHNAERISTAAREVSLAGE 300

Query: 308 DQHQAVDTVASAMNQLHASNQEVAQSAHQAEQAAHSANQAASQGREMITLTSTQMQSLRD 367
            Q  A   +A+A+ +L  S   ++ ++   E+ +  + Q A++G   +   S  ++++  
Sbjct: 301 QQSDATSAMAAAIEELTVSINHISDNSRDTERNSSESAQLAAEGETRVANASGAIKAIAG 360

Query: 368 QLTRTEQETQVLASETQSVSAVLEVIRGVAEQTNLLALNAAIEAARAGEQGRGFAVVADE 427
            ++      + L ++T+ VS +  VI  +A QTNLLALNAAIEAARAGEQGRGFAVVADE
Sbjct: 361 TVSDASGRIRDLETQTREVSGIASVISAIAAQTNLLALNAAIEAARAGEQGRGFAVVADE 420

Query: 428 VRTLATRTQASTNEIEQIIAQLQKKAQSVSQSMTQTQQQSRVTQQQAEQAQQMLNEIEAQ 487
           VR LA RT  +T EIEQ+I+ +Q     V Q+M     Q       AE+A Q L +I   
Sbjct: 421 VRQLAERTAKATVEIEQMISHIQTDTDMVVQAMGAALPQVESGVALAEEAAQSLRQIREG 480

Query: 488 IKTILSFNQHIAGASAQQSEATDEITRNLTQIAEHSTQASAQANQVAAASEQLMENGQHL 547
            +  L   + +A A+ +QS A+  I + + Q+A+   + SA     A  +E + +    L
Sbjct: 481 SELTLHRVRDVAEATMEQSSASTSIAQRVEQVAQMVEETSAAMKNTAETAEAVEQIASRL 540



 Score = 25.0 bits (53), Expect = 0.008
 Identities = 17/89 (19%), Positives = 36/89 (40%)

Query: 460 MTQTQQQSRVTQQQAEQAQQMLNEIEAQIKTILSFNQHIAGASAQQSEATDEITRNLTQI 519
           M Q        + +   A  ML      + ++    + I   S+Q +   + I+    ++
Sbjct: 236 MRQAADGDLTVRVETAPAGSMLASFSHMVASLRQVVKEIGSNSSQLTHNAERISTAAREV 295

Query: 520 AEHSTQASAQANQVAAASEQLMENGQHLA 548
           +    Q S   + +AAA E+L  +  H++
Sbjct: 296 SLAGEQQSDATSAMAAAIEELTVSINHIS 324