Pairwise Alignments

Query, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., methyl-accepting chemotaxis protein from Dechlorosoma suillum PS

 Score =  271 bits (693), Expect = 5e-77
 Identities = 168/548 (30%), Positives = 288/548 (52%), Gaps = 23/548 (4%)

Query: 19  LSIRNRLFLLTVVILVLLAIPFAIMVKDYRHDLMLEKQVQTQHLVESAYTLLEHYAQQAT 78
           +S++ RL +  +V L+ L +         +  L+ +++   +  ++ A T +     Q  
Sbjct: 5   MSLKGRLTVSLLVTLIGLIVLGTFQALHLKQQLLADRKATLETAIDIAMTAIVDIQAQEA 64

Query: 79  QGTLTTEQAQNTAKQAIAQLRYGANDYFWINDAQPAMVMHPMKPDLNGKDLRSFKDPNGK 138
           +G +  E+AQ  AK  I  +RY   +YF+I D++   VMHP++P+  GK     +D +G 
Sbjct: 65  KGAMGREEAQTLAKAVIRSMRYQGKEYFYIYDSKGMGVMHPVRPEYEGKSHWDRQDKSGA 124

Query: 139 ALFVEMVNVTQRNQQGVVEYQWPKPGAEQPVDKVSYVKLFKPWGWIIGTGIYVDDVNALV 198
                ++ V   ++ G  E    KPG++  V K+ Y++ F  W W++GTG+Y+DD++ L 
Sbjct: 125 YTVRNLIKVAL-DKSGYTETMTAKPGSDVQVPKLQYLQHFPAWDWVVGTGLYIDDLDTLF 183

Query: 199 MQRLSSILVWVVGTLLVLIVLA----------SLIGRSITQPCEETLATLKNIAQGEGDL 248
            Q+L      +V  ++VL+VLA          + +G+   +P E   A     A   GDL
Sbjct: 184 YQQLR-----LVALIIVLVVLAVGALSWARARATLGQIGGEPAEAVTAIR---AVAGGDL 235

Query: 249 TRQLTVTGKDELAQIAQAFNLFTNKIRHIIQEITPITESVTGSADELTQVAQSASSKAYD 308
           T  L     D +       N     +R +I EI      V  SA E+   A   +  A  
Sbjct: 236 TVSLGNARDDSMLG---ELNRLVQVLRQMIGEIAQGAGQVASSAQEINSTATRVADSAAT 292

Query: 309 QHQAVDTVASAMNQLHASNQEVAQSAHQAEQAAHSANQAASQGREMITLTSTQMQSLRDQ 368
           + +A   +A+AM +L  S   V+ +A   EQ A +A + A  G + +  T+  + ++ D 
Sbjct: 293 ETEATQNMAAAMEELTVSITHVSDNARDTEQHASNAAELAGVGEKSVDTTAANIATMADT 352

Query: 369 LTRTEQETQVLASETQSVSAVLEVIRGVAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 428
           + +  ++ + L    Q V+ V +VI+ +A QTNLLALNAAIEAARAGEQGRGFAVVADEV
Sbjct: 353 MGKAAEQVRALTDNAQEVARVAQVIKEIAGQTNLLALNAAIEAARAGEQGRGFAVVADEV 412

Query: 429 RTLATRTQASTNEIEQIIAQLQKKAQSVSQSMTQTQQQSRVTQQQAEQAQQMLNEIEAQI 488
           R LA RT+ +T EI  I++++Q +  + +Q M     ++   ++ A +  ++L+ I A  
Sbjct: 413 RVLAERTEKATVEISSIVSRIQDETLTAAQVMDAALPEAEKAKEAAAETSELLHRIAAGS 472

Query: 489 KTILSFNQHIAGASAQQSEATDEITRNLTQIAEHSTQASAQANQVAAASEQLMENGQHLA 548
           ++  S  + +A ++ +QSEA+  + + + +IA H  + ++++ Q  AA+  L    Q L 
Sbjct: 473 ESARSLVREVADSTREQSEASTALAQQVERIA-HQVEETSESMQHTAAASALEATAQALN 531

Query: 549 RSLAVFKI 556
           ++ A F+I
Sbjct: 532 QATARFRI 539