Pairwise Alignments

Query, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., methyl-accepting chemotaxis protein from Dechlorosoma suillum PS

 Score =  335 bits (860), Expect = 2e-96
 Identities = 190/546 (34%), Positives = 312/546 (57%), Gaps = 9/546 (1%)

Query: 15  SLRHLSIRNRLFLLTV-VILVLLAIP-FAIMVKDYRHDLMLEKQVQTQHLVESAYTLLEH 72
           +   + +R RL +    V+L LLA+  F++ V   R +LM +++++T+++VES   ++++
Sbjct: 3   NFERIKVRTRLMIFFAGVVLGLLAVGIFSLYV--LRDNLMEDRRLKTRNVVESVLGVVDY 60

Query: 73  YAQQATQGTLTTEQAQNTAKQAIAQLRYGANDYFWINDAQPAMVMHPMKPDLNGKDLRSF 132
           + +Q   G L+ E+A+  A  ++  +RY   +YFW+ D    M+MHP+KPD+ GK   + 
Sbjct: 61  FHKQQQAGKLSEEEAKRQAMDSLRNVRYDGKEYFWVQDRNLVMLMHPIKPDMEGKSQAAL 120

Query: 133 KDPNGKALFVEMVNVTQRNQQGVVEYQWPKPGAEQPVDKVSYVKLFKPWGWIIGTGIYVD 192
           KDPNGK  F EM NV + + +G V+Y WPKPG +QP  K+SYV  F  WGW++G+GIYVD
Sbjct: 121 KDPNGKLFFQEMENVVKASGKGFVDYLWPKPGFDQPAPKISYVAEFPAWGWVVGSGIYVD 180

Query: 193 DVNALVMQRLSSILVWVVGTLLVLIVLASLIGRSITQPCEETLATLKNIAQ--GEGDLTR 250
           DVNA+  Q+     + VV TL +L V++ LI  SI +      A    + +   EGDL R
Sbjct: 181 DVNAVFRQQALLFSIMVVITLAILSVISWLINSSILRQLGGEPAYAVEVVRHIAEGDLVR 240

Query: 251 QLTVTGKDELAQIAQAFNLFTNKIRHIIQEITPITESVTGSADELTQVAQSASSKAYDQH 310
            +  +  D L    Q       K+ +I  +I  +   ++  A+ ++  A+  S  A++Q 
Sbjct: 241 PVEYSSPDSLLAAMQTMQ---QKLANIFGDINGMASRLSSGAEHVSVAARETSVAAHNQA 297

Query: 311 QAVDTVASAMNQLHASNQEVAQSAHQAEQAAHSANQAASQGREMITLTSTQMQSLRDQLT 370
           Q+    A+++ Q+  S  EV++ A Q E  +      A +G  ++   + +++ +   + 
Sbjct: 298 QSTSASAASIEQMTVSISEVSEIATQTEANSSQTAALAEEGAGLVKNAAQEIELISRTVA 357

Query: 371 RTEQETQVLASETQSVSAVLEVIRGVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRT 430
            + ++ Q+L   +Q +  +  VI+ +A+QTNLLALNAAIEAARAGEQGRGFAVVADEVR 
Sbjct: 358 TSSEQIQLLQQRSQEIGGIANVIKEIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRK 417

Query: 431 LATRTQASTNEIEQIIAQLQKKAQSVSQSMTQTQQQSRVTQQQAEQAQQMLNEIEAQIKT 490
           LA RT  +T EI Q+I  +Q++ Q+  Q+M     Q     + A QA  ML+EI  Q   
Sbjct: 418 LAERTAKATTEIAQMIDSIQEETQTAVQAMATAAPQVDKGLELATQATAMLDEIHRQALD 477

Query: 491 ILSFNQHIAGASAQQSEATDEITRNLTQIAEHSTQASAQANQVAAASEQLMENGQHLARS 550
            L   + +A A+ +Q+    +I +++  IA  + + +A     AA +EQL      L ++
Sbjct: 478 SLGKVRDVALATTEQATTATDIAKHVEHIASMAEETNATMQNNAAEAEQLEGLADQLRQT 537

Query: 551 LAVFKI 556
           ++ F++
Sbjct: 538 VSYFRV 543