Pairwise Alignments

Query, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 558 a.a., methyl-accepting chemotaxis sensory transducer from Marinobacter adhaerens HP15

 Score =  224 bits (571), Expect = 7e-63
 Identities = 141/518 (27%), Positives = 264/518 (50%), Gaps = 22/518 (4%)

Query: 50  DLMLEKQVQTQHLVESAYTLLEHYAQQATQGTLTTEQAQNTAKQAIAQLRYGANDY-FWI 108
           +L+  ++   Q LVE A T      +  + G++  E+ Q      +  + +G  +Y F  
Sbjct: 50  ELVEARKAGLQQLVE-AVTSAAMELKNESPGSV--EEQQRRVIDFLKSVSFGDQNYVFAY 106

Query: 109 NDAQPAMVMHPMKPDLNGKDLRSFKDPNGKALFVEMVNVTQRNQQGVVEYQWPKPGAEQP 168
           N     M +H   P  +G      +D   K L  ++    +    G   ++W  P     
Sbjct: 107 NRKLEYMTVHG-DPSKDGVT----EDRQVKQLLKDLFKAAE--DSGFHYFEWGNPATGNI 159

Query: 169 VDKVSYVKLFKPWGWIIGTGIYVDDVNALV---MQRLSSILVWVVGTLLVL--------I 217
             KV+YV+L   W W++G G+Y+ D++  V    Q+  + +  V+  ++ +         
Sbjct: 160 EPKVAYVRLIPGWDWMLGAGVYMKDISEQVETSAQKSQATIESVIWNMIAISLVAFAGFA 219

Query: 218 VLASLIGRSITQPCEETLATLKNIAQGEGDLTRQLTVTGKDELAQIAQAFNLFTNKIRHI 277
           +L  ++ R++T+P  +T+  ++ IA G+GDL  +L  T +DEL ++A  FNLF +KI+++
Sbjct: 220 ILGYIVSRTVTKPLHQTVKLMEEIAVGDGDLGSRLPDTRQDELGEMAHWFNLFVDKIKNV 279

Query: 278 IQEITPITESVTGSADELTQVAQSASSKAYDQHQAVDTVASAMNQLHASNQEVAQSAHQA 337
           + +++  +  +    D L +           Q Q  D VA ++++L  + Q++A++ + A
Sbjct: 280 VIDVSETSRLLKDDTDLLDENVHETRRSINIQEQDTDQVAVSLSELATTTQQIAENCNFA 339

Query: 338 EQAAHSANQAASQGREMITLTSTQMQSLRDQLTRTEQETQVLASETQSVSAVLEVIRGVA 397
              +  A      G  + + +  QM  L   ++ + ++   L+  ++ +S +L+VI  V+
Sbjct: 340 NSGSADAENLVKNGVSLTSSSMEQMAELNTSISESARKITGLSERSKDISQILDVIHSVS 399

Query: 398 EQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLATRTQASTNEIEQIIAQLQKKAQSVS 457
           EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA+R+  S + I++++ Q  ++ +  +
Sbjct: 400 EQTNLLALNAAIEAARAGEHGRGFAVVADEVRQLASRSAESADSIQELLEQFIEETKDAA 459

Query: 458 QSMTQTQQQSRVTQQQAEQAQQMLNEIEAQIKTILSFNQHIAGASAQQSEATDEITRNLT 517
             M   +Q++  T    + A++ L  I   ++++      +A A+ +QS   +E+ +NL 
Sbjct: 460 VQMELIEQKTNRTNGSIKNAEESLKGIAVSVESMHEQITQVATATEEQSSVAEEVAQNLD 519

Query: 518 QIAEHSTQASAQANQVAAASEQLMENGQHLARSLAVFK 555
           +I   +    A    +++ SE + E  + L   +  FK
Sbjct: 520 RIVNTTKNNRASMESISSTSESVKELSERLRNLVEQFK 557