Pairwise Alignments

Query, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 749 a.a., methyl-accepting chemotaxis protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  234 bits (596), Expect = 1e-65
 Identities = 157/531 (29%), Positives = 261/531 (49%), Gaps = 63/531 (11%)

Query: 84  TEQAQNTAKQAIAQLRYGANDYFWINDAQPAMVMHPMKPDLNGKDLRSFKDPNGKALFVE 143
           T Q +  A   IA++R    +YFW+ND +P MVMHP++P+L+G DL    D  GK LFVE
Sbjct: 221 TAQLKQEALDQIARIRLSDGNYFWVNDLRPYMVMHPVRPELDGTDLSRTTDAEGKLLFVE 280

Query: 144 MVNVTQRNQQGVVEYQWPKPGAEQPVDKVSYVKLFKPWGWIIGTGIYVDDVNALV----- 198
           M  V +    G V Y++ KPGA     K+SYVKLF+PWGW+IG G+Y+DDV+  +     
Sbjct: 281 MAKVARDKGAGTVAYRFGKPGAAGDFPKLSYVKLFEPWGWVIGKGVYMDDVDREIVAEQE 340

Query: 199 --------MQRLSSILVWVVGTLLVLIVLASLIGRSITQPCEETLATLKNIAQGEGDLTR 250
                   +   S ++  ++ T +V +VL  +  R + QP  + +     +A GE D   
Sbjct: 341 RFSQAIGGLMTRSGLIGLMIATTMVGLVLFYIHYR-LRQPMNQLVRYAGQVASGELD--- 396

Query: 251 QLTVTGK--DELAQIAQAFNLFTNKIRHIIQE---------------------------- 280
             +V+G+   EL  +A A       +   ++E                            
Sbjct: 397 -ASVSGRFQGELLLLADALRSMVASLGERMEEAQLKGRLAEEEAAHARAATAEADDARRK 455

Query: 281 ---------------ITPITESVTGSADELTQVAQSASSKAYDQHQAVDTVASAMNQLHA 325
                          +  I  S+T ++ ++  +++  S  A  Q Q +   A+AM +++A
Sbjct: 456 AEGAKAEGMLAAAGILDTIVTSLTQASQKVAALSEEISDGAEGQRQRITETATAMEEMNA 515

Query: 326 SNQEVAQSAHQAEQAAHSANQAASQGREMITLTSTQMQSLRDQLTRTEQETQVLASETQS 385
           +  EVA ++ +A + A  A   A +G    + +   ++ ++      +     L  + ++
Sbjct: 516 TILEVAGNSSKAAENADHARGRAEEGASTASASVAAIEEVQRLADALKVNVAELGVKAEA 575

Query: 386 VSAVLEVIRGVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLATRTQASTNEIEQI 445
           +  ++ VI  +A+QTNLLALNAAIEAARAG+ GRGFAVVADEVR LA +T  +T+E+ + 
Sbjct: 576 IGRIINVINDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMHATSEVGEA 635

Query: 446 IAQLQKKAQSVSQSMTQTQQQSRVTQQQAEQAQQMLNEIEAQIKTILSFNQHIAGASAQQ 505
           I  +Q+  +  + S+ +         +   ++ + L+EI    +      + IA AS +Q
Sbjct: 636 IRAIQQATRDNTHSVERAAAAVDKATELVVRSGKALSEIVVLSEQSADRVRSIATASEEQ 695

Query: 506 SEATDEITRNLTQIAEHSTQASAQANQVAAASEQLMENGQHLARSLAVFKI 556
           S A++EITR L +I   S + +    Q A A   + +  + L   +   K+
Sbjct: 696 SAASEEITRALDEINGLSGRITEGIGQAAGAQRDMSQQCRKLNELIEKIKL 746



 Score =  114 bits (286), Expect = 1e-29
 Identities = 59/190 (31%), Positives = 97/190 (51%), Gaps = 30/190 (15%)

Query: 41  AIMVKDYRHDLMLEKQVQTQHLVESAYTLLE-HYAQ------------------------ 75
           A   +  R  +   +Q   + +V+SA +++E +YAQ                        
Sbjct: 37  AFQAQKTRESIYTHEQYSLRDMVDSASSIVEKYYAQSRDMEALKRLKRDELKLVVDAAAS 96

Query: 76  --QATQGTLTTEQAQNTAKQAIAQLR---YGANDYFWINDAQPAMVMHPMKPDLNGKDLR 130
             QA       E+    A++ +A LR   +  ++Y W+ND    ++MHP+ P + GK  R
Sbjct: 97  MVQAQVAAAPQERKAFVAREMLASLRGLRFAGDNYLWVNDLDTVVLMHPVSPQMEGKPQR 156

Query: 131 SFKDPNGKALFVEMVNVTQRNQQGVVEYQWPKPGAEQPVDKVSYVKLFKPWGWIIGTGIY 190
             +D  GKA+F E V++ +   +G+V+Y WP+PG +QP  KVS+VKL    GW++G G Y
Sbjct: 157 DIRDEQGKAIFTEFVSIARSKGEGMVDYMWPRPGQKQPQVKVSFVKLIPELGWVVGAGAY 216

Query: 191 VDDVNALVMQ 200
           +DD+ A + Q
Sbjct: 217 LDDMTAQLKQ 226