Pairwise Alignments

Query, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 513 a.a., methyl-accepting chemotaxis sensory transducer with Cache sensor from Paraburkholderia bryophila 376MFSha3.1

 Score =  246 bits (627), Expect = 2e-69
 Identities = 162/517 (31%), Positives = 267/517 (51%), Gaps = 43/517 (8%)

Query: 48  RHDLMLEKQVQTQHLVESAYTLLEHYAQQATQGTLTTEQAQNTAKQAIAQLRYGANDYFW 107
           R  ++ +++ Q   L++ A  ++  Y   A Q  +T ++A+  A   I  +RYG + Y  
Sbjct: 30  RASMIADRRDQLTSLIDQANHVVSRYYTLAQQHVITEDEAKKQALATIEAMRYGKDGYIS 89

Query: 108 INDAQPAMVMHPMKPDLNGKDLRSFKDPNGKALFVEMVNVTQRNQQGVVEYQWPKPGAEQ 167
           +ND+QP M+MHP K ++ GK+L  F DP G  LFV++VN   R   G V+Y W KPG+++
Sbjct: 90  VNDSQPVMLMHPFKKEMVGKNLAQFTDPAGNHLFVDIVNAGNREGGGFVDYLWAKPGSDK 149

Query: 168 PVDKVSYVKLFKPWGWIIGTGIYVDDVNALVMQRLSSILVWV--------VGTLLVLIVL 219
           PV K SY   F+PW W + TG+Y+DDV        SS+L W+        V T ++L+VL
Sbjct: 150 PVAKTSYAMHFQPWDWYVVTGMYMDDVQRAF---YSSLLRWLAITVALGAVATAIMLLVL 206

Query: 220 ASLIGRSITQPCEETLATLKNIAQGEGDLTRQLTVTGKDELAQIAQAFNLFTNKIRHIIQ 279
            S I RS+    E  +   + +A+  G+L  ++ V   D    +  A       +   + 
Sbjct: 207 RS-IRRSLGGDLEVAVEHAQLMAR--GNLATRVPVKDND-AGSLLHALQTMQAGLVDTVS 262

Query: 280 EITPITESVTGSADELTQVAQSASSKAYDQHQAVDTVASAMNQLHASNQEVAQSAHQAEQ 339
            +   TE++   A E+       S +  +Q  A+   AS+M+Q+  + ++ A SA QA Q
Sbjct: 263 RVRTGTENINIGASEIAAGNTDLSQRTEEQAAALVQTASSMDQMTVNVKQNADSALQAAQ 322

Query: 340 AAHSANQAASQGREMITLTSTQMQSLRDQLTRTEQETQVLASETQSVSAVLEVIRGVAEQ 399
            A  A   A++G  ++           D + RT  E   + + ++ +  ++ VI G+A Q
Sbjct: 323 LAGQAADVATRGSRVV-----------DDVVRTMGE---ITTSSRQIGDIIGVIDGIAFQ 368

Query: 400 TNLLALNAAIEAARAGEQGRGFAVVADEVRTLATRTQASTNEIEQIIAQLQKKAQSVSQS 459
           TN+LALNAA+EAARAGEQGRGFAVVA EVR+LA R+  +  EI+ +I           ++
Sbjct: 369 TNILALNAAVEAARAGEQGRGFAVVAAEVRSLAQRSATAAKEIKALI-----------ET 417

Query: 460 MTQTQQQSRVTQQQAEQAQQMLNEIEAQIKTILSFNQHIAGASAQQSEATDEITRNLTQI 519
            T T +           A   + EI   ++ +    + I+ AS +QS   +++ R + ++
Sbjct: 418 STTTVEAG---ASLVSNAGSTMGEIVQSVRRVNEILEEISNASREQSAGIEQVNRAVGEM 474

Query: 520 AEHSTQASAQANQVAAASEQLMENGQHLARSLAVFKI 556
            + + Q +A   Q AAA+  L +    L  +++ F +
Sbjct: 475 DQVTQQNAALVEQAAAAAHSLKDQVGVLREAISSFAL 511