Pairwise Alignments

Query, 711 a.a., lysine decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 761 a.a., lysine decarboxylase from Burkholderia phytofirmans PsJN

 Score =  489 bits (1260), Expect = e-142
 Identities = 270/694 (38%), Positives = 400/694 (57%), Gaps = 42/694 (6%)

Query: 34  VYPVDDKDLIKMIEM------NPRICGVLFDWDKYSLELCERISKVNEKLPVHAFANEQS 87
           +  +DD +L+  ++        P +   +     +  E+  R    N  +P+  +   ++
Sbjct: 61  ILSIDDDELLPYVDNVVVEGETPELAAAIVALRAFVTEVRRR----NADIPIFLYGETRT 116

Query: 88  TLDIS---LTDLRLNVHFFEYALGMADDIAIKINQATQEYKDAIMPPFTKALFKYVEEGK 144
           +  +    L +L   +H FE      + +A  I + T+ Y D++ PPF K L +Y +EG 
Sbjct: 117 SRHLPNDILRELHGFIHMFE---DTPEFVARHIIRETKVYLDSLAPPFFKELVQYADEGS 173

Query: 145 YTFCTPGHMGGTAFQKSPVGSIFYDFYGPNTFKADVSISMPELGSLLDHSGPHKEAEEYI 204
           Y++  PGH GG AF KSP+G +F+ F+G N  +ADV  ++ ELG LLDH+GP   +E   
Sbjct: 174 YSWHCPGHSGGVAFLKSPLGQMFHQFFGENMLRADVCNAVDELGQLLDHTGPVAASERNA 233

Query: 205 ARTFNADASYIVTNGTSTSNKIVGMFSAPAGSTVLVDRNCHKSLTHLMMMTDVTPIYFRP 264
           AR F+AD  + VTNGTSTSNKIV   +   G  VLVDRNCHKS+ H + MT   P++  P
Sbjct: 234 ARIFSADHVFFVTNGTSTSNKIVWHGTVAPGDIVLVDRNCHKSILHAITMTGAIPVFLTP 293

Query: 265 TRNAYGILGGIPQNEFSREVIAEKVANTPGAS---------APSYAVITNSTYDGLLYNT 315
           TRN +GI+G IP++EF  E I +K+   P A           P    IT STYDG++YN 
Sbjct: 294 TRNNFGIIGPIPRSEFEPENIKKKILANPFAREALAKNPNLKPRILTITQSTYDGVIYNV 353

Query: 316 QFIKESLD--CKHIHFDSAWVPYTNFNRIYEGKCGM-SGEAMPGKVFYETQSTHKLLAAF 372
           + IKE L      +HFD AW+P+  F+  Y+    + +G    G + + T STHKLLA  
Sbjct: 354 EMIKEMLGDWLDTLHFDEAWLPHAEFHEFYQDMHAIGAGRPRIGAMVFATHSTHKLLAGI 413

Query: 373 SQASMIHVK----GEFDRESFNEAFMMHTSTSPQYGIVASTETAAAMMRGNTGRKLMQDS 428
           SQAS I V+      FD+  FNEA++MHTSTSPQY I+AS + AAAMM    G  L+++S
Sbjct: 414 SQASQIVVQDSKNSRFDKHRFNEAYLMHTSTSPQYAIIASCDVAAAMMEAPGGPALVEES 473

Query: 429 IDRAIRFRKEIKRLKGE-SEGWFFDVWQP-----ENIETTECWKLDPNQDWHGFKNLDDN 482
           I  A+ FR+ + ++  E  + WFF VW P     E I + E W L PN +WHGF  L DN
Sbjct: 474 IAEALDFRRAMIKVDAEYGDDWFFKVWGPDQFAEEGIGSREDWMLRPNDEWHGFGPLADN 533

Query: 483 HMYLDPIKITLLTPGMSKDGELEQSGIPASLVSKYLDEHGIVVEKTGPYNLLFLFSIGID 542
              LDPIK T++TPG+   G   ++GIPA++V+KYL EHGI+VEKTG Y+   +F+IGI 
Sbjct: 534 FNMLDPIKATIVTPGLDMGGGFGETGIPAAIVTKYLAEHGIIVEKTGLYSFFIMFTIGIT 593

Query: 543 KSKAMQLLRGLTEFKRGYDLNLTIRTMLPSLYREDPVFYEGMRIQELAQGIHDLTRKYQL 602
           K +   ++  L +FK  YD N  +  +LP      P+ YE + +++L Q IH + R   +
Sbjct: 594 KGRWNSMVTELQQFKDDYDNNQPLWRVLPEFVSHHPM-YERVGLRDLCQQIHSVYRANDI 652

Query: 603 PELMYKAFDVLPEMKVTPHVAWQQELRGQTEEILLNEMVGRVSANMILPYPPGVPLVLPG 662
             L  + +    E  + P  A+ +    + + + ++E+ GRV++ ++ PYPPG+PL++PG
Sbjct: 653 ARLTTEMYLSSMEPAMKPSDAFAKLAHREIDRVPIDELEGRVTSILLTPYPPGIPLLIPG 712

Query: 663 EMVTDSSRPVLDFLEMLCEIGAHYPGFETDIHGL 696
           E     ++ ++++L    E    +PGF TDIHGL
Sbjct: 713 ERF---NKTIVNYLRFAREFNERFPGFHTDIHGL 743