Pairwise Alignments

Query, 445 a.a., lysine:cadaverine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., Arginine/ornithine antiporter ArcD from Pseudomonas fluorescens FW300-N2E2

 Score =  137 bits (345), Expect = 7e-37
 Identities = 125/458 (27%), Positives = 210/458 (45%), Gaps = 33/458 (7%)

Query: 1   MSSNAKKIGLIACTGVVAGNMMGSGIALLPSTLAS---VGSISIYSWLICIVGALSLAFV 57
           MS    K+ L A   +V G+M+G GI  LP  +A+   VG++ I  W I  VG L+LAFV
Sbjct: 1   MSDTPGKLRLGALVALVVGSMIGGGIFSLPQNMAASADVGAVLI-GWAITAVGMLTLAFV 59

Query: 58  FARLATKNPQ-EGGPIAYA-GEVSPVFGFQTGVLYYHANWIGNLAIAITGVSYLSVFFPV 115
           F  LA + P  +GG  AYA        GF +   Y+ + W+GN+   +   S L  FFPV
Sbjct: 60  FQTLANRKPDLDGGVYAYAKAGFGDYMGFSSAWGYWISAWLGNVGYFVLLFSTLGYFFPV 119

Query: 116 LN--NPIPAGLATIASVWLFTLVNLLG---GSWVSRLCTIGLVLILIPVVGTALFGWTH- 169
               N + A + +   +W    + L G    ++++ + TI  V+ L+  V  A+F +   
Sbjct: 120 FGEGNTVAAVIGSSVLLWAVHFLVLRGIKEAAFINLVTTIAKVVPLVLFVLIAVFAFKLD 179

Query: 170 -FDSALYSQNWNVSAGSDGHAVITAVLICLWSFVGVESAAVSSGMVENPKRT-VPLATML 227
            F + ++    N   GS  + V   +L+ +W F+G+E A++ S   E  KRT V  AT++
Sbjct: 180 IFTADIWGLK-NPDLGSVLNQVRNMMLVTVWVFIGIEGASIFSARAE--KRTDVGKATVI 236

Query: 228 GTGLAGLIYVLSTQMISGMFPASEVAASGAP-FALATTALFGSWTAPFVSAFTALACFTS 286
           G     L  VL   +  G+    E+A    P  A     + G W A  +S    ++   +
Sbjct: 237 GFITVLLFLVLVNVLSLGIMTQPELAKLQNPSMAAVLEHVVGHWGAVLISVGLIISLLGA 296

Query: 287 LGSWMMLVGEAGKRAANDGNFPKVFGETDRNGVPKKGLLIASSMMTLLMLVLMFFSSETA 346
           L SW++L  E    AA D   P+     + N VP   L + ++M+ L +++ +F +S   
Sbjct: 297 LLSWVLLCAEIMFAAAKDHTMPEFLRRENANHVPANALWLTNAMVQLFLVITLFSAS--- 353

Query: 347 HASDLFNQLTTDAVLLTMLPYFYSSINLI-------RFEGMTTRNTFVMLFSGIASLFCM 399
                +  L   A  + ++PY +S+   +        +EG        ++   +A ++ +
Sbjct: 354 ----TYLSLIYLATSMILVPYLWSAAYAVLLAVRGETYEGFAAERRKDLIIGAVALIYAV 409

Query: 400 VAL-AGAEGSTLTATFIMSLIILMFYSKKAGLDKYLET 436
             L AG     L +  + +   ++F   K  L K + T
Sbjct: 410 WLLYAGGIKYLLLSALLYAPGAILFAKAKRELGKPIFT 447