Pairwise Alignments

Query, 445 a.a., lysine:cadaverine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., Arginine/ornithine antiporter ArcD from Pseudomonas fluorescens FW300-N2E2

 Score =  125 bits (314), Expect = 3e-33
 Identities = 114/461 (24%), Positives = 205/461 (44%), Gaps = 31/461 (6%)

Query: 1   MSSNAKKIGLIACTGVVAGNMMGSGIALLPSTLAS---VGSISIYSWLICIVGALSLAFV 57
           M    +K+ L A   +V G+M+G GI  LP  +A+   VG++ I  W I  +G L+LAFV
Sbjct: 1   MPQPIEKLPLGALIALVVGSMIGGGIFSLPQNMAARADVGAVLI-GWAITAIGMLTLAFV 59

Query: 58  FARLATKNPQ-EGGPIAYA-GEVSPVFGFQTGVLYYHANWIGNLAIAITGVSYLSVFFPV 115
           F  LA + PQ   G  AYA        GF +   Y+ + W+GN+   +   S L  FFPV
Sbjct: 60  FQTLANRKPQLNSGVYAYAKAGFGDYMGFSSAWGYWISAWLGNVGYFVLLFSTLGYFFPV 119

Query: 116 L---NNPIPAGLATIASVWLFTLVNLLGGSWVSRLCTIGLVLILIPVVGTALFGWTHFDS 172
               N P+  G A++  +W    + L G    + +  +  V  ++P++   +     F +
Sbjct: 120 FGQGNTPVAIGCASLL-LWAVHFLVLRGIQEAAFINLVTTVAKVVPLLMFVVMAAVAFKA 178

Query: 173 ALYSQN-W---NVSAGSDGHAVITAVLICLWSFVGVESAAVSSGMVENPKRTVPLATMLG 228
            +++++ W   N   GS    V   +L+ ++ F+G+E A+V S   E  +  V  AT++G
Sbjct: 179 EVFTRDIWGAMNPDLGSVMDQVRNMMLVTVFVFIGIEGASVYSARAER-RADVGRATVIG 237

Query: 229 -TGLAGLIYVLSTQMISGMFPASEVAASGAPFALATTALFGSWTAPFVSAFTALACFTSL 287
             G+  L+ +++   +  M             A     + G W A  +S   A++   +L
Sbjct: 238 FLGVLALLVLVNVLSLGVMSQRELAQLQNPSLAGVLEHIVGPWGALLISLGLAVSLLGAL 297

Query: 288 GSWMMLVGEAGKRAANDGNFPKVFGETDRNGVPKKGLLIASSMMTLLMLVLMFFSSETAH 347
            SW +L  E     A D   P    + + N  P   L + + M+ L +L+ +F       
Sbjct: 298 LSWALLCAEILYATARDKTMPAFLTKENANRAPVNALWLTNGMIQLFLLITLF------- 350

Query: 348 ASDLFNQLTTDAVLLTMLPYFYSSINLI-------RFEGMTTRNTFVMLFSGIASLFCMV 400
           ++  +  L   A  + ++PY +S+   +        +E  + R    +   G+A  + + 
Sbjct: 351 SAGTYTSLIYLASSMILVPYLWSAAYAVLLCARGETYEQGSARRMKDLCIGGVALCYAVW 410

Query: 401 AL-AGAEGSTLTATFIMSLIILMFYSKKAGLDKYLETHPQQ 440
            L AG     L +  + +  +++F   K    + L TH ++
Sbjct: 411 LLYAGGVKYLLLSALLYAPGVILFAQAKREQGQPLFTHVEK 451