Pairwise Alignments

Query, 445 a.a., lysine:cadaverine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., arginine/ornithine antiporter from Pseudomonas stutzeri RCH2

 Score =  135 bits (339), Expect = 4e-36
 Identities = 117/447 (26%), Positives = 205/447 (45%), Gaps = 29/447 (6%)

Query: 1   MSSNAKKIGLIACTGVVAGNMMGSGIALLPSTLASVGSIS--IYSWLICIVGALSLAFVF 58
           M++N+K++ L A   +V G+M+G GI  LP  +A+  S    +  W I  VG L+LAFVF
Sbjct: 1   MAANSKQLKLGALVALVVGSMIGGGIFSLPQNMAASASAGGILIGWAITAVGMLTLAFVF 60

Query: 59  ARLATKNPQ-EGGPIAYA-GEVSPVFGFQTGVLYYHANWIGNLAIAITGVSYLSVFFPVL 116
             LA + P+ + G  AYA        GF +   Y+ + WIGN++  +   S L  F P+ 
Sbjct: 61  QSLANRKPELDAGVYAYAKAGFGDYMGFSSAWGYWISAWIGNVSYFVLLFSTLGYFVPMF 120

Query: 117 N--NPIPAGLATIASVWLFTLVNLLG---GSWVSRLCTIGLV--LILIPVVGTALFGWTH 169
              N +PA +     +W    + L G    ++++ + TI  +  LIL  V+    F    
Sbjct: 121 GEGNTLPAVIGASLVLWGVHFLVLRGIREAAFINLVTTIAKIVPLILFIVITAVAFRLEV 180

Query: 170 FDSALYSQNWNVSAGSDGHAVITAVLICLWSFVGVESAAVSSGMVENPKRTVPLATMLGT 229
           F +  + +  N+  G     V   +L+ +W F+G+E A++ S   E  +  V  AT++G 
Sbjct: 181 FTADFWGRG-NIELGGVMQQVRNMMLVTVWVFIGIEGASIFSARAER-RSDVGRATVIGF 238

Query: 230 GLAGLIYVLSTQMISGMFPASEVAASGAP-FALATTALFGSWTAPFVSAFTALACFTSLG 288
                + VL   +  G+   +E+A    P  A     + G W A  +S    ++   +L 
Sbjct: 239 CSVLALLVLVNVLSMGIMSQAELAGLKNPSMAGVLEQVVGRWGAVLISVGLVVSLAGALL 298

Query: 289 SWMMLVGEAGKRAANDGNFPKVFGETDRNGVPKKGLLIASSMMTLLMLVLMFFSSETAHA 348
           SW +L  E    AA D   P+   + +   VP   L +++ ++ L +++ +F +S     
Sbjct: 299 SWTLLCAEILFAAARDHTMPQFLRKENAKHVPVNALWLSNGLIQLFLIITLFNAS----- 353

Query: 349 SDLFNQLTTDAVLLTMLPYFYSS-------INLIRFEGMTTRNTFVMLFSGIASLFCM-V 400
              +  L   A  + ++PYF+S+       +    +EG        +L + IA+L+ M +
Sbjct: 354 --TYLSLLYLATSMILVPYFWSAAYGLLLGLRGEGYEGAPRERRKDLLNAAIATLYAMWL 411

Query: 401 ALAGAEGSTLTATFIMSLIILMFYSKK 427
             AG     L +  + +  +L F   K
Sbjct: 412 VYAGGMQYVLLSALLYAPGVLFFAKAK 438