Pairwise Alignments

Query, 445 a.a., lysine:cadaverine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., arginine:ornithine antiporter, APA family from Pseudomonas syringae pv. syringae B728a

 Score =  132 bits (333), Expect = 2e-35
 Identities = 116/459 (25%), Positives = 206/459 (44%), Gaps = 33/459 (7%)

Query: 1   MSSNAKKIGLIACTGVVAGNMMGSGIALLPSTLASVGSIS--IYSWLICIVGALSLAFVF 58
           MS+   K+ L A   +V G+M+G GI  LP  +A+   +   +  W I  +G L+LAFVF
Sbjct: 1   MSTPPGKLRLGALVALVVGSMIGGGIFSLPQNMAASAEVGAVLVGWAITAIGMLTLAFVF 60

Query: 59  ARLATKNPQ-EGGPIAYA-GEVSPVFGFQTGVLYYHANWIGNLAIAITGVSYLSVFFPVL 116
             LA + P  +GG   YA        GF +   Y+ + W+GN+   +   S L  FFPV 
Sbjct: 61  QTLANRKPDLDGGVYVYAKAGFGDYMGFSSAWGYWISAWLGNVGYFVLLFSTLGYFFPVF 120

Query: 117 N--NPIPAGLATIASVWLFTLVNLLG---GSWVSRLCTIGLVLILIPVVGTALFGWTHFD 171
              N + A +     +W    + L G    ++++ + T+  V+ LI  V  A+F    F 
Sbjct: 121 GEGNTVAAVIGASVLLWGVHFLVLRGIQEAAFINLVTTVAKVVPLILFVLIAVFA---FK 177

Query: 172 SALYSQN-WNVSA---GSDGHAVITAVLICLWSFVGVESAAVSSGMVENPKRTVPLATML 227
             +++ + W +     GS  + V   +L+ +W F+G+E A++ S      +  V  AT++
Sbjct: 178 LDIFTTDIWGLEKPDMGSVMNQVRHMMLVTVWVFIGIEGASIFSARASK-RSDVGKATVI 236

Query: 228 GTGLAGLIYVLSTQMISGMFPASEVAASGAP-FALATTALFGSWTAPFVSAFTALACFTS 286
           G     L+ VL   +  G+    E+A    P  A     + G W A  +S    ++   +
Sbjct: 237 GFITVLLLLVLVNVLSLGVMTQPELAKLQNPSMAAVLEHIVGPWGAALISVGLIISLLGA 296

Query: 287 LGSWMMLVGEAGKRAANDGNFPKVFGETDRNGVPKKGLLIASSMMTLLMLVLMFFSSETA 346
           L SW++L  E    AA D   P+     + N VP   L + ++M+ + +++ +F SS   
Sbjct: 297 LLSWVLLCAEIMFAAAKDHTMPEFLSRENANHVPANALWLTNAMVQVFLVITLFSSS--- 353

Query: 347 HASDLFNQLTTDAVLLTMLPYFYSSINLIR-------FEGMTTRNTFVMLFSGIASLFCM 399
                +  L   A  + ++PY +S+   +R       +E         +  + +A L+ +
Sbjct: 354 ----TYLSLIYLATSMILIPYLWSAAYALRLAIGGEGYENARRERRKDLFIAAVALLYAI 409

Query: 400 -VALAGAEGSTLTATFIMSLIILMFYSKKAGLDKYLETH 437
            +  AG     L +  + +  +++F   K    K + TH
Sbjct: 410 WLIYAGGVKYLLLSALLYAPGVILFAKAKLEAKKPVFTH 448