Pairwise Alignments

Query, 445 a.a., lysine:cadaverine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 473 a.a., ArcD2 arginine/ornithine antiporter from Sinorhizobium meliloti 1021

 Score =  119 bits (299), Expect = 2e-31
 Identities = 114/443 (25%), Positives = 198/443 (44%), Gaps = 28/443 (6%)

Query: 5   AKKIGLIACTGVVAGNMMGSGIALLPSTLA-SVGSI-SIYSWLICIVGALSLAFVFARLA 62
           A+K+ L A TG+V G+M+G+GI  LP T   + G   +I +W I   G   LA VF  LA
Sbjct: 2   AQKLSLFALTGMVVGSMVGAGIFSLPRTFGVATGPFGAIIAWCIAGGGMYMLARVFQSLA 61

Query: 63  TKNPQ-EGGPIAYAGEVSPVF-GFQTGVLYYHANWIGNLAIAITGVSYLSVFFPVLN--N 118
            + P  + G  AYA E    + GF +   Y+  + IGN++  +   S L  FFPV    N
Sbjct: 62  ERKPDLDAGVFAYAKEGFGDYPGFLSAFGYWIGSCIGNVSYWVLIKSTLGNFFPVFGDGN 121

Query: 119 PIPAGLATIASVWLFTLVNLLGGSWVSRLCTIGLVLILIPVVGTALFGWTHFDSALYSQN 178
            + A L     +WLF  + L G    + + T+  V  +IP++   +  +  F   L+  N
Sbjct: 122 TVVAILFASVGIWLFHFMILRGIQQAAFVNTVVTVAKVIPIIAFIIILFFFFKLDLFRLN 181

Query: 179 WNVSAGSDGHAVITAV----LICLWSFVGVESAAVSSGMVENPKRTVPLATMLGTGLAGL 234
           +    G     ++  +    L  ++ F+G+E A+  S   +  +  +  AT++G      
Sbjct: 182 FWGGEGMPEATLLQQIQATMLATVFVFIGIEGASNYSRYAQ-ARSDIGTATIMGFIGVSA 240

Query: 235 IYVLSTQMISGMFPASEVAASGAP-FALATTALFGSWTAPFVSAFTALACFTSLGSWMML 293
           + VL T +        E+AA   P  A    A+ G W A F+S    ++   +  +W ++
Sbjct: 241 LMVLVTLLPYAALTRPEIAAMSQPSMAGVLAAVVGPWGAVFISIGVIVSVLGAYLAWSLV 300

Query: 294 VGEAGKRAANDGNFPKVFGETDRNGVPKKGLLIASSMMTLLMLVLMFFSSETAHASDLFN 353
             E    AA   + P++FG  ++N VP   L + +       +V+  F   T  + D F 
Sbjct: 301 CAEVLYVAARTDDMPRLFGTENQNKVPAAALWLTN-------IVVQLFVISTYWSQDAFA 353

Query: 354 QLTTDAVLLTMLPY-------FYSSINLIRFEGMTTRNTFVMLFSGIASL--FCMVALAG 404
            +      ++++PY       F  +     +E      T  ++ + IA++  F M+   G
Sbjct: 354 LMLNLTSSMSLIPYMFVAAFGFMLAQRAETYEVRPRERTRDLIIASIAAVYTFFMIVAGG 413

Query: 405 AEGSTLTATFIMSLIILMFYSKK 427
            +   L+A       IL F++++
Sbjct: 414 IKFVLLSALLYAPGTILYFWARR 436