Pairwise Alignments

Query, 445 a.a., lysine:cadaverine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., ArcD1 arginine/ornithine antiporter from Sinorhizobium meliloti 1021

 Score =  114 bits (285), Expect = 7e-30
 Identities = 110/447 (24%), Positives = 201/447 (44%), Gaps = 28/447 (6%)

Query: 1   MSSNAKKIGLIACTGVVAGNMMGSGIALLPSTLASVGSI--SIYSWLICIVGALSLAFVF 58
           M+S A+K+ L +   +V G+M+G+GI  LP T         +I +W I   G  +LA VF
Sbjct: 1   MTSTAQKLSLASLAALVVGSMVGAGIFSLPRTFGDATGPFGAIVAWCIAGAGIFTLAHVF 60

Query: 59  ARLAT-KNPQEGGPIAYAGE-VSPVFGFQTGVLYYHANWIGNLAIAITGVSYLSVFFPVL 116
             LA  K+  + G  AYA        GF + + Y+    I +++  +   + L  FFP+ 
Sbjct: 61  RVLAERKSDLDAGVYAYANAGFGDYAGFLSVLGYWLVGCIADVSYWVLIKATLGAFFPIF 120

Query: 117 N--NPIPAGLATIASVWLFTLVNLLGGSWVSRLCTIGLVLILIPVVGTALFGWTHFDSAL 174
              N I A L +  ++W F  + L G    + + T+  V  ++P++   +     F++ L
Sbjct: 121 GDGNTIAAVLVSSVALWGFHFMILRGIKEAAAINTVVTVAKIVPILIFIVILLGAFETDL 180

Query: 175 YSQNW----NVSAGSDGHAVITAVLICLWSFVGVESAAVSSGMVENPKRTVPLATMLGTG 230
           +  N+    ++   S    +   +L+ ++ F+GVE A+V S      +  V +AT LG  
Sbjct: 181 FRSNFWGGADMPEASLFEQIRATMLVTVFVFIGVEGASVYSRYARK-RSDVGVATTLGFV 239

Query: 231 LAGLIYVLSTQMISGMFPASEVAASGAP-FALATTALFGSWTAPFVSAFTALACFTSLGS 289
           +   + VL T +  G     E+AA   P  A    ++ G W + FVSA   ++   +  +
Sbjct: 240 VVLGLMVLVTLLPYGALERPEIAAMRQPSMASVLESIVGPWGSVFVSAGLIVSVLGAYLA 299

Query: 290 WMMLVGEAGKRAANDGNFPKVFGETDRNGVPKKGLLIASSMMTLLMLVLMFFSSETAHAS 349
           W ++  E    AA +G+ P V    + N VP   L +++ ++ L ++  +F       + 
Sbjct: 300 WSLICVEVLFCAAKNGDMPSVLARENSNSVPAAALWLSNGVIQLFLISTLF-------SE 352

Query: 350 DLFNQLTTDAVLLTMLPYF----YSSINLIRFEGMTTR---NTFVMLFSGIASLFC--MV 400
           D F  +      + ++PY     Y  +   R E    R       ++ +G A+++   M+
Sbjct: 353 DAFRLMVNLTSAMVLIPYLLVAAYGFLVAKRGETYNIRPKERFRDLILAGAATVYTAFMI 412

Query: 401 ALAGAEGSTLTATFIMSLIILMFYSKK 427
              G +   L+A        L FY+++
Sbjct: 413 YAGGLKFLLLSAILYALGTALFFYARR 439