Pairwise Alignments

Query, 445 a.a., lysine:cadaverine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., transport protein from Sinorhizobium meliloti 1021

 Score =  193 bits (490), Expect = 1e-53
 Identities = 131/427 (30%), Positives = 210/427 (49%), Gaps = 10/427 (2%)

Query: 3   SNAKKIGLIACTGVVAGNMMGSGIALLPSTLASVGSISIYSWLICIVGALSLAFVFARLA 62
           S+ K +GL ACT +V GNM+GSG  L P+ +A  G+++I  W++   GA+ L   FARLA
Sbjct: 5   SSGKSLGLAACTAIVVGNMVGSGFYLSPAAVAPYGNLAIVIWIVMGAGAICLGLTFARLA 64

Query: 63  TKNPQEGGPIAYAGEVSPVF-GFQTGVLYYHANWIGNLAIAITGVSYLSVFFPVLNNPIP 121
             +P  GGP AY       F GF     Y+ + W     IA+     +  FFP L     
Sbjct: 65  KLSPAVGGPYAYTRLAYGDFPGFLIAWGYWISIWASLPVIAVAFAGVVIDFFPFLRGRGT 124

Query: 122 AGLATIASVWLFTLVNLLGGSWVSRLCTIGLVLILIPVVGTALFGWTHFDSALYSQNWNV 181
           A L T++ +WL  LVNL G         I     +IP    AL G  + D + ++ ++N 
Sbjct: 125 ATLLTLSVIWLVVLVNLRGVHAAGLFSEITTYAKMIPFGAVALLGLFYIDFSHFA-DFNP 183

Query: 182 SAGSDGHAVITAVLICLWSFVGVESAAVSSGMVENPKRTVPLATMLGTGLAGLIYVLSTQ 241
           S      A      + +++++G+ESA V +G V + +RT+P +T+LG  +A  +YVL T 
Sbjct: 184 SGQPLLQASAALAPLTMFAYLGLESATVPAGDVRDAERTIPRSTVLGIAIAVTLYVLGTI 243

Query: 242 MISGMFPASEVAASGAPFALATTALFGSWTAPFVSAFTALACFTSLGSWMMLVGEAGKRA 301
           ++ G+ P  E+  S APF+ A   ++G      +S    L+   +L  W +L+G+    A
Sbjct: 244 VVMGLVPREELVHSVAPFSEAARRMWGPAGELAISLAVVLSSIGALNGWTLLMGQVPMAA 303

Query: 302 ANDGNFPKVFGETDRNGVPKKGLLIASSMMTLLMLVLMFFSSETAHASDLFNQLTTDAVL 361
           A DG FP +F       VP  G+++++++ T+L+LV    S   +    LF  L+T   +
Sbjct: 304 ARDGLFPPLFSRLSARHVPATGIVVSATLATILVLVQAAGSEGFSSIYRLFVGLST---M 360

Query: 362 LTMLPYFY----SSINLIRFEGMTTRNTFVMLFSGIASLFCMVALAGAEGSTLTATFIMS 417
             ++PY +    SS+   R  G T     V L   +   F +  L G     +    ++ 
Sbjct: 361 TAVIPYAFCALASSLVSARVSGGTLIPR-VTLIELVGFTFAIFTLYGCGAEPVLYGLVLL 419

Query: 418 LIILMFY 424
           L+ +  Y
Sbjct: 420 LLSIPVY 426