Pairwise Alignments

Query, 445 a.a., lysine:cadaverine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 418 a.a., inner membrane protein YjeH (RefSeq) from Shewanella amazonensis SB2B

 Score = 90.5 bits (223), Expect = 9e-23
 Identities = 95/433 (21%), Positives = 181/433 (41%), Gaps = 36/433 (8%)

Query: 8   IGLIACTGVVAGNMMGSGIALLPS-TLASVGSISIYSWLICIVGALSLAFVFARLATKNP 66
           IG     G++A  ++G+G+ +LP  TLA  G+ ++++W +  +  + +  VF RLA++ P
Sbjct: 8   IGRWQGAGLMATTLLGTGVFILPQMTLAKAGTSALWAWALLTLAIIPVTLVFGRLASRFP 67

Query: 67  QEGGPIAYAGEV-SPVFGFQTGVLYYHANWIGNLAIAITGVSYLSVFFPVLN-NPIPAGL 124
              GP  +  +      G   G+++     +G  A  +    +++   P+     + A L
Sbjct: 68  HAAGPAFFVEKAFGRTLGRSIGLIFLLVIPMGAPAAILMTFQFVTALLPLAGVELLLAQL 127

Query: 125 ATIASVWLFTLVNLLGGSWVSRLCTIGLVLILIPVVGTALF---GWTHFDSAL--YSQNW 179
             I  +W   L  L   +      T+G+V +++     ALF   G  H    L  +   W
Sbjct: 128 LVIGLLWFANLKGLQVSAKAQFALTLGIVAVVL-----ALFMGLGVQHHAVELPDFESAW 182

Query: 180 NVSAGSDGHAVITAVLICLWSFVGVESAAVSSGMVENPKRTVPLATMLGTGLAGLIYVLS 239
                     ++ A  I  WSF+GVE+    +     P++ +  A MLGT L GLIY+  
Sbjct: 183 QTGP------MMLAAGIAFWSFLGVEAMTHLAHDFREPEKDMIPAMMLGTVLVGLIYLGC 236

Query: 240 TQMISGMFPASEVAASGAPFALATTALFGSWTAPFVSAFTALACFTSLGSWMMLVGEAGK 299
           T ++  + P+S   A    F      L G+  A  +      A   ++  +         
Sbjct: 237 TSLL-WLVPSSTGVAMMGVF----DTLLGAGGAQVIGILGVSAGLATVNVYAGSAARLLW 291

Query: 300 RAANDGNFPKVFGETDRNGVPKKGLLIASSMMTLLMLVLMFFSSETAHASDLFNQLTTDA 359
             + +G  P+ F   + +GVP +        M L++ ++  F  +         QL   +
Sbjct: 292 SFSREGIMPRYFQRLNDHGVPVRAQTAILGSMALVLTLVFVFEQD-------LEQLIAWS 344

Query: 360 VLLTMLPYFYSSINLIRFEGMTTRNTFVMLFSGIASLFCMVALAGAEGSTLTATFIMSLI 419
             + ++ Y  S +   R  G ++R  +++L  G    FC+       G    A  ++ L+
Sbjct: 345 NGVFVIIYAMSMLAAWRLLGASSR-LWILLGLG----FCVALGVALGGRMFYAVLLLMLV 399

Query: 420 ILMFYSKKAGLDK 432
           + + + +K  L +
Sbjct: 400 LPLLWWQKGHLQR 412