Pairwise Alignments

Query, 445 a.a., lysine:cadaverine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., inner membrane protein YjeH (RefSeq) from Shewanella oneidensis MR-1

 Score = 82.0 bits (201), Expect = 3e-20
 Identities = 94/422 (22%), Positives = 177/422 (41%), Gaps = 33/422 (7%)

Query: 8   IGLIACTGVVAGNMMGSGIALLPS-TLASVGSISIYSWLICIVGALSLAFVFARLATKNP 66
           IG     G++A  ++G+G+ +LP  T+A   + ++ +W +  +  + +A +F RLA+  P
Sbjct: 12  IGRWQGAGLMATTLLGTGVFILPQMTIAKAHAGALIAWSLLTLAIIPVALIFGRLASVFP 71

Query: 67  QEGGPIAYAGEV-SPVFGFQTGVLYYHANWIGNLAIAITGVSYLSVFFPVLNNPIPAGLA 125
              GP  +  +      G   G+++     +G  A  +    +++   P L+        
Sbjct: 72  HAAGPAYFVEKAFGRTAGRTIGLIFLLVVPMGAPAAILMTFQFVNALIP-LDGWFKVSAE 130

Query: 126 TIASVWLFTLVNLLGGSWVSRLCTIGLVLILIPVVGTALFGWTHFDSALYSQNWNVSAGS 185
            +    LF L   L G  VS     GL L ++ +V   LFG +       +     S  S
Sbjct: 131 VLVIFGLFLLN--LRGIQVSAKLQFGLTLCIVAIV-VVLFGASSLQPGHLT-----SLAS 182

Query: 186 DGHAVITAVLIC----LWSFVGVESAAVSSGMVENPKRTVPLATMLGTGLAGLIYVLSTQ 241
            G   I+ ++I      WSF+G+E+    +     P++ +  A M+GT L G+IYV  T 
Sbjct: 183 YGTPEISTMMIAAGIAFWSFLGIEAMTHLADDFRRPQQDMIPAMMMGTVLVGIIYVACTL 242

Query: 242 MISGMFPASEVAASGAPFALATTALFGSWTAPFVSAFTALACFTSLGSWMMLVGEAGKRA 301
           ++  +   + VA  G        AL G + A  +      +   ++  +           
Sbjct: 243 ILLLVPTDNSVAMIG-----VFDALLGGYGAQVIGVLGIASGLATVNVYAASAARLVWSF 297

Query: 302 ANDGNFPKVFGETDRNGVPKKGLLIASSMMTLLMLVLMFFSSETAHASDLFNQLTTDAVL 361
           + +G  P+ F   +R+GVP + L    S+M  ++++      E  H     N +     L
Sbjct: 298 SCEGILPRCFAVKNRHGVPIRALGALLSVMASVIVLTHITGQELEHLIAWSNGVFVVIYL 357

Query: 362 LTMLPYFYSSINLIRFEGMTTRNTFVMLFSGIASLFCMVALAGAEGSTLTATFIMSLIIL 421
           + ML    ++  L+       R+   ++  G    FC+ AL  A G+++    ++ L + 
Sbjct: 358 MAML----AAAKLL------PRHNLPLVVLGCG--FCL-ALGIALGASMAYVLVLILFVA 404

Query: 422 MF 423
            F
Sbjct: 405 PF 406