Pairwise Alignments

Query, 445 a.a., lysine:cadaverine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., putrescine-ornithine antiporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  233 bits (595), Expect = 7e-66
 Identities = 137/371 (36%), Positives = 205/371 (55%), Gaps = 6/371 (1%)

Query: 1   MSSNAKKIGLIACTGVVAGNMMGSGIALLPSTLASVGSISIYSWLICIVGALSLAFVFAR 60
           MS +  KIG++  T +   NMMGSGI +LP+ LA VG+IS+ SWL+   G+ +LAF FA+
Sbjct: 1   MSKSENKIGVVQLTIITIVNMMGSGIIMLPTQLAQVGTISVLSWLVTAAGSTALAFAFAK 60

Query: 61  LATKNPQEGGPIAYAGEVSPVFG-FQTGVLYYHANWIGNLAIAITGVSYLSVFFPVLNNP 119
               + + GG   YA       G F     Y  +  I N+AIAI+ V Y +V   V  +P
Sbjct: 61  CGMFSKKSGGMGGYAEYAFGRSGNFMANYTYAVSLLIANVAIAISAVGYAAVLLEVNLSP 120

Query: 120 IPAGLATIASVWLFTLVNLLGGSWVSRLCTIGLVLILIPVVGTALFGWTHFDSALYSQNW 179
           +   LATI  +WL T+ N  G     R+ ++ +  I++PV+G +L GW  FD  LY   W
Sbjct: 121 MAICLATIGVLWLATVANFGGARITGRVSSVTVWGIILPVIGVSLIGWFWFDIDLYKGAW 180

Query: 180 NVSAGSDGHAVITAVLICLWSFVGVESAAVSSGMVENPKRTVPLATMLGTGLAGLIYVLS 239
           N        A+  ++ + LW+F+G+ESA  +S  V+NP++ VP+A M GT  A LIY++S
Sbjct: 181 NPHDMPFFKALGGSIAMTLWAFLGLESACANSEAVDNPEKNVPIAVMGGTLGAALIYIVS 240

Query: 240 TQMISGMFPASEVAASGAPFALATTALFGSWTAPFVSAFTALACFTSLGSWMMLVGEAGK 299
           T +I+G+ P +E+A+S APF LA   +F       V A   ++C  SL  W   + +  K
Sbjct: 241 TNVIAGIVPNAELASSNAPFGLAFAQMFNPVVGKIVMACAIISCTGSLLGWQFTIAQVFK 300

Query: 300 RAANDGNFPKVFGETDRNGVPKKGLLIASSMMTLLMLVLMFFSSETAHASDLFNQLTTDA 359
            +A++G FPKVF +  +   P  G+ I  S+ TLL L+ +     +   S  F  L   A
Sbjct: 301 ASADEGFFPKVFAKVSKADAPIWGMTIIVSIQTLLSLMTI-----SPSLSKQFEALVNLA 355

Query: 360 VLLTMLPYFYS 370
           V+  ++PY  S
Sbjct: 356 VVTNIVPYILS 366