Pairwise Alignments

Query, 519 a.a., transcriptional regulator CadC from Vibrio cholerae E7946 ATCC 55056

Subject, 502 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 55.5 bits (132), Expect = 5e-12
 Identities = 41/127 (32%), Positives = 58/127 (45%), Gaps = 10/127 (7%)

Query: 1   MIGICFQINDWVLCIDENKLYRQDREVSAEPRLINLLHFLAEHAGEVFGREELIQHVWDG 60
           M G  F    +VL      L R D  V+   R + LL  L    GE+ G+ EL+   W G
Sbjct: 1   MQGSRFVFGPFVLDPGAGTLVRNDEPVAVGYRGLKLLEALVGRPGEILGKAELMDAAWSG 60

Query: 61  AIVTDQVVTQSIFELRKLL---RDGREENLSYVVTVPKRGYKLVANVQRLDG---NPYVS 114
             V +  +T  I +LRK+L    DG E    ++ T+P+ GY+    V++  G   NP   
Sbjct: 61  RAVEEGNLTVQIAQLRKMLGAPPDGGE----WIATIPRVGYRFTGPVEKAGGAKRNPLPL 116

Query: 115 RQEESTA 121
             E S A
Sbjct: 117 PDEPSIA 123



 Score = 28.1 bits (61), Expect = 8e-04
 Identities = 45/217 (20%), Positives = 92/217 (42%), Gaps = 28/217 (12%)

Query: 214 FHAQALTHELADGIAQKLMADLTQVSDYRVILGKTAYSSGILPGKSIMVRVNDQD----- 268
           F +       ADG+ + L+ DL+++    VI   + ++     GK+  VR   +D     
Sbjct: 130 FSSDPEQESFADGLTEDLITDLSRIYGLFVIARNSTFA---FKGKARDVREIAEDLGVRY 186

Query: 269 ----------GHEFLDLELKNNSSDAVLFSRQYPLDSQHLASVLKSAEWDVMQALKIPNA 318
                     G   ++ +L +  S   L++ ++    + + +V       +++AL +   
Sbjct: 187 LLEGSARRAAGRVRINAQLVDAVSGNHLWAERFDRSLEDIFAVQDEVTGKIVEAL-LGRL 245

Query: 319 EQQAQRLLVDFPRQPAALGLYVRANHYLNVADRPQFQKGIYL-LEQVLKLEPDNHYVQAE 377
             QA R   + P+   A  L VRA   ++  D PQ  +  +L L + + L+P+  Y +A 
Sbjct: 246 RPQAPR---NRPKNLEAYDLCVRARKLID--DSPQTAREAHLMLTRAVSLDPE--YAEAY 298

Query: 378 LLIAY-HVQQAISPDQALNQDRMLVLSEQLQQVSYSP 413
             +A  H  + +   + +  +R + L    + V+  P
Sbjct: 299 RWLAMNHWMRWVHWGEPVEPNRSVALELARKAVAIDP 335