Pairwise Alignments

Query, 352 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 436 a.a., hemolysin, putative (RefSeq) from Shewanella amazonensis SB2B

 Score =  103 bits (258), Expect = 6e-27
 Identities = 87/338 (25%), Positives = 154/338 (45%), Gaps = 20/338 (5%)

Query: 5   AIYISVAIGVSFICSVLEAVLLSITPSYLAQLRQQGHPAANRLAGLKADIDRPLASI-LT 63
           ++ I + IG+S   S+ E  L +     L QL  +G+  A ++  L+A        + + 
Sbjct: 7   SLIILMLIGISCFFSMSEIALAASRKIRLRQLADEGNERARKVLELQAHPGSFFTVVQIG 66

Query: 64  LNTIAHTIGAATAGAQAAVVFG-------SQWLGLFSAVLTLGI-----LVLSEIVPKTI 111
           LN +A   G     A    +         ++WLG FS +L+  +     ++L++++PK I
Sbjct: 67  LNAVAIMGGIVGESAFTPHIMALLDGIVPAKWLGQFSFILSFMLVTSLFILLADLMPKRI 126

Query: 112 GATYWRELAPQASLVLRWMVWALTPFVWFSEQITKRLARKVEAPKLR------DEISAMA 165
                  +A      +   +  L P VW    +   L R +  P  R      D+I A+ 
Sbjct: 127 AMAMPERVAVSLVGAMGLCITVLRPLVWVFNGLANGLFRMLRIPTERNDAITEDDIYAVM 186

Query: 166 MLANENGEFAEGESKMLNNLLAIQNVPVTQVMTPRPVLFRVSADLTIDEFIEQHRDTPFS 225
               E G   +GE +M+ N+  +Q+VPVT  MTPR  L       T ++   +    P S
Sbjct: 187 DAGAEAGVIDKGEQQMMENVFEMQSVPVTSAMTPRESLVFFLQSDTEEDIKRKIAADPHS 246

Query: 226 RPLIYSEEKDNIVGFVHRLELFKEQQNGQG-NLLLGDVMRPIHVVLNTLSLPKAFDQMMQ 284
           + L+   + D I G+V   +L  +  +GQ  NL    +++   ++ +TLSL +A D    
Sbjct: 247 QFLLCDGQLDAIKGYVDSKDLLIKVISGQALNLKDPSLVQTCPIIPDTLSLSEALDYFRN 306

Query: 285 KRLQLSVVVDEYGSVQGLLTLEDIFEHLLGEEIIDEAD 322
            R+  +VV++EY  V G++T  D+   ++G   + E +
Sbjct: 307 NRVDFAVVLNEYALVLGVVTFNDLQSAVMGTWSLAEGE 344