Pairwise Alignments

Query, 352 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  124 bits (311), Expect = 5e-33
 Identities = 91/338 (26%), Positives = 164/338 (48%), Gaps = 17/338 (5%)

Query: 4   LAIYISVAIGVSFICSVLEAVLLSITPSYLAQLRQQGHPAANRLAGLKADIDRPLASILT 63
           L + + V I +S   S  E  ++S+    L  L   GH  A R + L    DR +  IL 
Sbjct: 9   LLLSLLVLILISAYFSGSETAMMSLNRYRLRHLASNGHKGAKRASKLLDRPDRLIGLILI 68

Query: 64  LNTIAHTIGAATAGAQAAVVFGSQWLGLFSAVLTLGILVLSEIVPKTIGATYWRELAPQA 123
            N + + + +A A      ++G   + + + +LT+ +LV +E+ PKT+ A +   +A  +
Sbjct: 69  GNNLVNILASAIATIIGMRIWGDVGVAIATGLLTVVVLVFAEVTPKTVAALHPERIAYPS 128

Query: 124 SLVLRWMVWALTPFVWFSEQITKRLARKVEAPKL--RDEIS--AMAMLANENGE-FAEGE 178
           SL+L+W++  L P V     IT  + R +    +   D +S   +  + +E G    +  
Sbjct: 129 SLLLKWLLVILQPLVKVMNIITSGILRLIGIRNVATNDALSQEELRTVVHEAGALIPQRH 188

Query: 179 SKMLNNLLAIQNVPVTQVMTPRPVLFRVSADLTIDEFIEQHRDTPFSRPLIYSEEKDNIV 238
             ML ++L ++ V V  +M PR  ++ ++ +    +   Q   +P +R L+Y +  D+ V
Sbjct: 189 QDMLLSILDLEKVTVEDIMIPRAEIYAINVNDDFKQINRQVVTSPHTRVLVYRDTIDDAV 248

Query: 239 GFVH---RLELFKEQQNGQGNLLLGDVMRPIHVVLNTLSLPKAFDQMMQKRLQLSVVVDE 295
           GF+H    L L  +++  +  LL    ++ ++ +     L          + ++ +VVDE
Sbjct: 249 GFIHLRDALRLQSKEEFSKATLL--RAVKELYFIPEGTPLNVQLANFQHNKERIGLVVDE 306

Query: 296 YGSVQGLLTLEDIFEHLLGEEIIDEADRTTDMQQLATE 333
           YG +QGL+TLEDI E ++G       D TT M   A+E
Sbjct: 307 YGDIQGLVTLEDILEEIVG-------DFTTSMVPTASE 337