Pairwise Alignments

Query, 352 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 377 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  320 bits (820), Expect = 4e-92
 Identities = 168/351 (47%), Positives = 235/351 (66%), Gaps = 4/351 (1%)

Query: 1   MFLLAIYISVAIGVSFICSVLEAVLLSITPSYLAQLRQQGHPAANRLAGLKADIDRPLAS 60
           M  L + + VAIG+SF+CSV EAVLLS+TPS++A L++    AA RL+  K +++ PL S
Sbjct: 1   MITLIVIVFVAIGISFLCSVFEAVLLSVTPSFIANLKETHPAAAERLSHQKENVESPLVS 60

Query: 61  ILTLNTIAHTIGAATAGAQAAVVFGSQWLGLFSAVLTLGILVLSEIVPKTIGATYWRELA 120
           ILTLNTIAHT+GAA AGAQAA VFG + LG+FS VLT  IL  SEI+PKT+GA YWR LA
Sbjct: 61  ILTLNTIAHTVGAAVAGAQAAKVFGDEMLGVFSGVLTFLILFFSEIIPKTLGANYWRSLA 120

Query: 121 PQASLVLRWMVWALTPFVWFSEQITKRLARKVEAPKLRDEISAMAMLANENGEFAEGESK 180
           P  SLVL WM     P +W S+Q+T++L +  +   +R E+SAMA + +E+GE  E ES 
Sbjct: 121 PSVSLVLLWMERITKPLIWMSQQVTRKLGKGDDGQYIRQEMSAMAKIGHESGELDEQESM 180

Query: 181 MLNNLLAIQNVPVTQVMTPRPVLFRVSADLTIDEFIEQHRDTPFSRPLIYSEEKDNIVGF 240
           +L  +L+++ +PVT +MTPR V+F V A +T  EF + H+ +PF+R  ++  ++DNIVG+
Sbjct: 181 ILTQMLSVKEMPVTAIMTPRTVMFSVPATMTQTEFAKLHKKSPFTRIPVFDGDRDNIVGY 240

Query: 241 VHR-LELFKEQQNGQGNLLLGDVMRPIHVVLNTLSLPKAFDQMMQKRLQLSVVVDEYGSV 299
           V+R   L  E+   Q    +  V R + +V  T  +   F  M+++  ++++VVDEYGS 
Sbjct: 241 VNRNTILLSERDTPQAP--ISAVRRNLVIVPETAKILPLFQLMIKRNTKIAMVVDEYGSG 298

Query: 300 QGLLTLEDIFEHLLGEEIIDEADRTTDMQQLATERWEHWKRQHRMIESRDE 350
            G++TLEDI E LLG EI+D  D  TDMQQLA   W+  +  H+ I   DE
Sbjct: 299 HGIVTLEDIIESLLGLEIVDSNDPVTDMQQLARRLWKR-RMTHKGIRISDE 348