Pairwise Alignments

Query, 352 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  130 bits (326), Expect = 8e-35
 Identities = 93/321 (28%), Positives = 161/321 (50%), Gaps = 10/321 (3%)

Query: 3   LLAIYISVAIGVSFICSVLEAVLLSITPSYLAQLRQQGHPAANRLAGLKADIDRPLASIL 62
           +L I + V I +S   S  E  ++S+    L  L   GH  A R   L    DR +  IL
Sbjct: 8   VLVIILFVLIIISAYFSGSETAMMSLNRYRLRHLANNGHKGAKRAIRLLERPDRLIGLIL 67

Query: 63  TLNTIAHTIGAATAGAQAAVVFGSQWLGLFSAVLTLGILVLSEIVPKTIGATYWRELAPQ 122
             N + + + +A A      +FG   + + + VLTL +LV +E+ PKT+ A +   +A  
Sbjct: 68  IGNNLVNILASAIATILGIRLFGDVGVAIATGVLTLVVLVFAEVTPKTVAALHPERIAFP 127

Query: 123 ASLVLRWMVWALTPFVWFSEQITKRLAR--KVEAPKLRDEIS--AMAMLANENGE-FAEG 177
           +S++L+ ++  L+P V     IT    R   + + K  D +S   +  + +E G    + 
Sbjct: 128 SSVLLKALLVLLSPLVKIVNFITSTFLRLLGIRSVKADDALSQEELRTVVHEAGALIPQR 187

Query: 178 ESKMLNNLLAIQNVPVTQVMTPRPVLFRVSADLTIDEFIEQHRDTPFSRPLIYSEEKDNI 237
             +ML +++ ++ V V  +M PR  L+ ++ +       +Q   +P +R L+Y +  D+ 
Sbjct: 188 HQEMLLSIMDLEKVTVEDIMIPRSDLYAINVNDDFSRINKQVIQSPHTRVLLYRDNIDDA 247

Query: 238 VGFVH---RLELFKEQQNGQGNLLLGDVMRPIHVVLNTLSLPKAFDQMMQKRLQLSVVVD 294
           VGFVH    L L  +QQ  + +LL    ++ I+ +     L        Q + ++ +VVD
Sbjct: 248 VGFVHLRDALRLQSKQQFSKSSLL--RAVKEIYFIPEGTPLNVQLANFQQNKERIGLVVD 305

Query: 295 EYGSVQGLLTLEDIFEHLLGE 315
           EYG +QGL+TLEDI E ++G+
Sbjct: 306 EYGDIQGLVTLEDILEEIVGD 326