Pairwise Alignments

Query, 352 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 87.8 bits (216), Expect = 5e-22
 Identities = 86/342 (25%), Positives = 149/342 (43%), Gaps = 30/342 (8%)

Query: 6   IYISVAIGVSFICSVLEAVLLSITPSYLAQLRQQGHPAANRLAGLKADIDRPLASI-LTL 64
           + I + IG S   S+ E  L +     L QL  +G P A R+  L+A        + + L
Sbjct: 8   LIILLLIGTSCFFSMSEIALAAARKIRLRQLADEGDPRAERVLQLQAHPGSFFTVVQIGL 67

Query: 65  NTIAHTIGAATAGAQAAVV-------FGSQWLGLFSAVLTLGI-----LVLSEIVPKTIG 112
           N +A   G     A    +           WL   S VL+  I     +++++++PK   
Sbjct: 68  NAVAIMGGIVGESAFTPYIRAGLESWVADPWLSQLSFVLSFIIVTSLFILIADLMPKRAA 127

Query: 113 ATYWRELAPQASLVLRWMVWALTPFVWFSEQITKRLARKVEAPKLR------DEISAMAM 166
                 +A      + + +  LTP VW    +   + R ++ P  R      D+I A+  
Sbjct: 128 MAMPERVALVLVGPMTFCIRLLTPLVWVFNGLANAIFRLLQIPTARNDQVTSDDIYAVMD 187

Query: 167 LANENGEFAEGESKMLNNLLAIQNVPVTQVMTPRP--VLFRVSADLTIDEFIEQH-RDTP 223
              E G   + E +M+ N+  +Q VPVT  MT R   V F +  D   +E I++   + P
Sbjct: 188 AGAEAGVLDKDEQQMIENVFEMQTVPVTAAMTARESLVYFLLQDD---EEVIKRKIAEDP 244

Query: 224 FSRPLIYSEEKDNIVGFVHRLELFKEQQNGQGNLLLGDVMRPIH---VVLNTLSLPKAFD 280
            ++ L+   + D I G V   EL     NGQ   L    +  +H   ++ ++LSL ++ +
Sbjct: 245 HTKFLVCDGQLDTIKGVVDAKELLIRVINGQSITLKDSTL--VHNCLIIPDSLSLSESME 302

Query: 281 QMMQKRLQLSVVVDEYGSVQGLLTLEDIFEHLLGEEIIDEAD 322
                R   +VV++EY  V G++T  D+   ++G   + E++
Sbjct: 303 YFKNHRADFAVVMNEYALVVGIVTTNDLQSAVMGAWSLHESE 344