Pairwise Alignments

Query, 352 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., CBS domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 86.3 bits (212), Expect = 1e-21
 Identities = 81/333 (24%), Positives = 146/333 (43%), Gaps = 24/333 (7%)

Query: 12  IGVSFICSVLEAVLLSITPSYLAQLRQQGHPAANRLAGLKADIDRPLASILTLNTIAHTI 71
           IG S   S+ E  L +     L QL  +G   A ++  L++       +++ +   A  I
Sbjct: 14  IGASCFFSMSEIALAASRKIRLRQLADEGDARAEKVLHLQS-YPGSFFTVVQIGLNAVAI 72

Query: 72  GAATAGAQAA----VVFGSQWLG---------LFSAVL-TLGILVLSEIVPKTIGATYWR 117
                G  A       F S WL          L S +L T   +++++++PK I      
Sbjct: 73  MGGIVGESAFRPYFYQFLSSWLADPWLSQVSFLMSFLLVTSAFILVADLMPKRIAMAMPE 132

Query: 118 ELAPQASLVLRWMVWALTPFVWFSEQITKRLARKVEAPKLR------DEISAMAMLANEN 171
           ++A      +   +  L P VWF   +   + + ++ P  R      D+I A+     E 
Sbjct: 133 QVALAVVGPMSVCIAVLRPLVWFFNGMASGIFKLLQIPTARNDEITSDDIYAVMNAGAEA 192

Query: 172 GEFAEGESKMLNNLLAIQNVPVTQVMTPRPVLFRVSADLTIDEFIEQHRDTPFSRPLIYS 231
           G   +GE +M+ N+  +Q V VT  MT R  L       + ++   +  + P ++ L+  
Sbjct: 193 GVLDKGEQQMMENVFEMQTVSVTSAMTARESLVYFLLQDSEEDIKRKIAEDPHTKFLVCD 252

Query: 232 EEKDNIVGFVHRLELFKEQQNGQGNLLLGD--VMRPIHVVLNTLSLPKAFDQMMQKRLQL 289
            + D + GFV   EL     NG+ N+ L D  ++    ++ +TLSL +A +     R   
Sbjct: 253 GQLDMVKGFVDAKELLIRVINGE-NITLKDTSLVHTSLIIPDTLSLSEAMEYFKNSRADF 311

Query: 290 SVVVDEYGSVQGLLTLEDIFEHLLGEEIIDEAD 322
           +VV++EY  V G++T  D+   ++G   + E++
Sbjct: 312 AVVMNEYALVVGIVTTNDLQRAVMGAWSLHESE 344