Pairwise Alignments

Query, 352 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  325 bits (833), Expect = 1e-93
 Identities = 164/341 (48%), Positives = 233/341 (68%), Gaps = 1/341 (0%)

Query: 1   MFLLAIYISVAIGVSFICSVLEAVLLSITPSYLAQLRQQGHPAANRLAGLKADIDRPLAS 60
           M  L I + VA+ VSF+CSV EAVLLS+TPSY+A L Q    AA RL  LK +I+ PL S
Sbjct: 1   MLTLIIIVLVAVTVSFLCSVFEAVLLSVTPSYIATLDQTDSAAAARLRKLKENIEAPLVS 60

Query: 61  ILTLNTIAHTIGAATAGAQAAVVFGSQWLGLFSAVLTLGILVLSEIVPKTIGATYWRELA 120
           ILTLNT+AHT+GAA AGAQAA VFG   LG+FS VLT  IL  SEI+PK++GA +WR LA
Sbjct: 61  ILTLNTVAHTVGAAVAGAQAAKVFGDDMLGVFSGVLTFIILFFSEIIPKSVGANHWRRLA 120

Query: 121 PQASLVLRWMVWALTPFVWFSEQITKRLARKVEAPKLRDEISAMAMLANENGEFAEGESK 180
           P  S+ + WM  A  P +W S+Q+T+ L +  E   +R E+SAMA +  E+GE  E ESK
Sbjct: 121 PSVSIAITWMKRATLPLIWMSQQVTRLLGKGEEGQYIRQEMSAMAKIGQESGELDEQESK 180

Query: 181 MLNNLLAIQNVPVTQVMTPRPVLFRVSADLTIDEFIEQHRDTPFSRPLIYSEEKDNIVGF 240
           +L  +L +++VPVT +MTPR V+F +   LT +EF++++RD PF+R  +Y ++ D+++G+
Sbjct: 181 ILTQMLKVRDVPVTAIMTPRTVMFSLPISLTQNEFVQEYRDKPFTRIPVYDQDHDDVIGY 240

Query: 241 VHRLELFKEQQNGQGNLLLGDVMRPIHVVLNTLSLPKAFDQMMQKRLQLSVVVDEYGSVQ 300
           + R ++   ++    N  +G++ R + VV  T  +   F++M+++  Q+++VVDEYGS Q
Sbjct: 241 ITRTDVLLAERY-TPNAPIGELKRSLFVVPETAKILPLFERMIKRNTQIAMVVDEYGSSQ 299

Query: 301 GLLTLEDIFEHLLGEEIIDEADRTTDMQQLATERWEHWKRQ 341
           G++T EDI E LLG EI+D  D  TDMQQLA + W    +Q
Sbjct: 300 GIVTQEDIIESLLGLEIVDVNDPATDMQQLARKLWTKRMKQ 340