Pairwise Alignments

Query, 352 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., CBS domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 89.7 bits (221), Expect = 1e-22
 Identities = 64/236 (27%), Positives = 113/236 (47%), Gaps = 12/236 (5%)

Query: 91  LFSAVLTLGI-----LVLSEIVPKTIGATYWRELAPQASLVLRWMVWALTPFVWFSEQIT 145
           +FS VL + I     +V+ E+VPK IG      +A   +  + ++  A  PFVW     T
Sbjct: 98  IFSTVLVVIIVTYVSIVIGELVPKRIGQVSAESIACIMAKPMVFLAIATKPFVWMLSGST 157

Query: 146 KRLAR------KVEAPKLRDEISAMAMLANENGEFAEGESKMLNNLLAIQNVPVTQVMTP 199
             L R      +++    +++I AM    +  G     E  M+ N+  +    ++ +M P
Sbjct: 158 HALMRLMGFSHRLDDNVTQEDIQAMLQEGSSAGVIEHNEHAMVKNVFRLDERTISSLMVP 217

Query: 200 RPVLFRVSADLTIDEFIEQHRDTPFSRPLIYSEEKDNIVGFVHRLELFKEQQNGQGNLLL 259
           R  +  +  +L +D  +     +P SR  +     D++VG +   +L  E   G+  L L
Sbjct: 218 RSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAGE-RLEL 276

Query: 260 GDVMRPIHVVLNTLSLPKAFDQMMQKRLQLSVVVDEYGSVQGLLTLEDIFEHLLGE 315
            D+++  + V N+LS  +  +       Q+  VVDEYG ++GL+TL+D+ + L GE
Sbjct: 277 VDLVKNCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTGE 332