Pairwise Alignments

Query, 352 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 423 a.a., hemolysin protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  107 bits (266), Expect = 7e-28
 Identities = 87/320 (27%), Positives = 150/320 (46%), Gaps = 10/320 (3%)

Query: 4   LAIYISVAIGVSFICSVLEAVLLSITPSYLAQLRQQGHPAANRLAGLKADIDRPLASILT 63
           L I++ V I  S   S  E  ++++    L  L   GH  A R   L    DR +  IL 
Sbjct: 9   LLIFLLVLILFSAYFSGSETAMMTLNRYRLRHLASNGHKGAIRALKLLERPDRLIGLILI 68

Query: 64  LNTIAHTIGAATAGAQAAVVFGSQWLGLFSAVLTLGILVLSEIVPKTIGATYWRELAPQA 123
            N + + + A+ A      ++G   + + S VLTL +LV  E+ PKTI A     +A  +
Sbjct: 69  GNNLVNILAASIATIIGMRLWGDLGVAIASGVLTLVVLVFGEVTPKTIAALNPERIAFPS 128

Query: 124 SLVLRWMVWALTPFVWFSEQITKRLARKVEAPKL--RDEIS--AMAMLANENGE-FAEGE 178
           S +L  +       V     IT  + R V    +   D +S   +  + +E G    +  
Sbjct: 129 SYLLIALSKIFAYVVTSVNFITTGILRLVGIKSISSSDALSKEELRTVVHEAGALIPQRH 188

Query: 179 SKMLNNLLAIQNVPVTQVMTPRPVLFRVSADLTIDEFIEQHRDTPFSRPLIYSEEKDNIV 238
            +ML ++L ++ V V  +M PR  ++ ++ +        Q   +P +R L+Y +  D+ V
Sbjct: 189 QEMLLSILDLEKVTVEDIMVPRSDIYAINVNDDFKFINRQVIQSPHTRVLVYRDTIDDAV 248

Query: 239 GFVH---RLELFKEQQNGQGNLLLGDVMRPIHVVLNTLSLPKAFDQMMQKRLQLSVVVDE 295
           GF+H    L L  ++Q  + +LL    ++ ++ +     L          + ++ +VVDE
Sbjct: 249 GFIHLRDALRLQSKEQFSKSSLL--RAVKELYFIPEGTPLNVQLANFQHNKERIGLVVDE 306

Query: 296 YGSVQGLLTLEDIFEHLLGE 315
           YG +QGL+TLEDI E ++G+
Sbjct: 307 YGDIQGLVTLEDILEEIVGD 326