Pairwise Alignments

Query, 352 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 418 a.a., putative hemolysin (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 86.3 bits (212), Expect = 1e-21
 Identities = 86/348 (24%), Positives = 156/348 (44%), Gaps = 43/348 (12%)

Query: 6   IYISVAIGVSFIC--SVLEAVLLSITPSYLAQLRQQGHPAANRLAGLKADIDRPLASILT 63
           IYIS+ I ++F    S +E   +S+      ++ ++G   +  L+    + +  ++++L 
Sbjct: 3   IYISLLITMAFSAFFSGMEIAFVSVDKLRF-EMERKGGITSRILSIFFKNSNEFISTMLV 61

Query: 64  LNTIAHTIGAATAGAQAAVVFGSQWLGLF-----------SAVLTLGILVLSEIVPKTIG 112
            N IA  I     G   A + G   L  F           + + TL ILV  E +PKT+ 
Sbjct: 62  GNNIALVI----YGILMAQIIGDNLLAGFIDNHFLMVLAQTVISTLIILVTGEFLPKTLF 117

Query: 113 ATYWRELAPQASLVLRWMVWALTPFVWFSEQITKRLARKVEAPKLRDEISAMAM------ 166
                 +   A++ L      L P    S  ++    R +   K+  + S  A       
Sbjct: 118 KINPNLVLNVAAIPLFICYVILYPVSKLSSGLSCLFLR-IFGMKVNKDASDKAFGKVDLD 176

Query: 167 ---------LANENGEFAEGESKMLNNLLAIQNVPVTQVMTPRPVLFRVSADLTIDEFIE 217
                     ANE  E  + E K+  N L   N+ +   + PR  +  V    ++DE   
Sbjct: 177 YFVQSSIDNAANE--EELDTEVKIFQNALDFSNIKIRDCIVPRTEVVAVDLTTSLDELKS 234

Query: 218 QHRDTPFSRPLIYSEEKDNIVGFVHRLELFKEQQNGQGNLLLGDVMRPIHVVLNTLSLPK 277
           +  ++  S+ ++Y    DN+VGF+H  E+F++ ++ + N      ++ + +V  T+S  K
Sbjct: 235 RFIESGISKIIVYDGNIDNVVGFIHSSEMFRDPKDWRDN------VKDVPIVPETMSAHK 288

Query: 278 AFDQMMQKRLQLSVVVDEYGSVQGLLTLEDIFEHLLGEEIIDEADRTT 325
                M ++  ++VVVDE+G   G+++LED+ E + G +I DE D T+
Sbjct: 289 LMKLFMLQKRTIAVVVDEFGGTSGIVSLEDLVEEIFG-DIEDEHDNTS 335