Pairwise Alignments

Query, 352 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., putative hemolysin (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 99.4 bits (246), Expect = 2e-25
 Identities = 86/344 (25%), Positives = 158/344 (45%), Gaps = 32/344 (9%)

Query: 2   FLLAIYISVAIGVSFICSVLEAVLLSITPSYLAQLRQQGHPAANRLAGLKADIDRPLASI 61
           FL+ + + V  G   I ++ E  L+S + + L  L  +G+ +A    G+   ++ P   +
Sbjct: 3   FLIILLLLVLNG---IFAMYEIALVSSSKARLETLAGKGNKSAR---GVLKQLEEPEKFL 56

Query: 62  LTLNTIAHTIGAATAGAQAAVVFGSQWLGLFS------------------AVLTLGILVL 103
            T+  I  T+    +GA   V      + LFS                   ++T   L++
Sbjct: 57  STIQ-IGITLIGIVSGAYGGVAIADDLVPLFSLIPGAEAYARNLAMITTVVIITYLSLII 115

Query: 104 SEIVPKTIGATYWRELAPQASLVLRWMVWALTPFVWFSEQITKRLARKV-----EAPKLR 158
            E+VPK+I  +     A   S ++  +     PFVWF    T+ L R +     E P  +
Sbjct: 116 GELVPKSIALSNPERYATLFSPIMILLTKVSYPFVWFLSISTRLLNRIIGVKNEERPMTQ 175

Query: 159 DEISAMAMLANENGEFAEGESKMLNNLLAIQNVPVTQVMTPRPVLFRVSADLTIDEFIEQ 218
           +EI  +   ++E G   + E++ML ++    +    ++MT R  L     D T D+ ++ 
Sbjct: 176 EEIKMILHQSSEQGVIDKEETEMLRDVFRFSDKRANELMTHRRDLVIFHPDDTKDKVMKT 235

Query: 219 HRDTPFSRPLIYSEEKDNIVGFVHRLELFKEQQNGQGNLLLGDVMRPIHVVLNTLSLPKA 278
             +  +S+ L+  E KD I+G V   ++     N +    L ++ RP   +  +L   K 
Sbjct: 236 IEEEHYSKYLLVDERKDEIIGVVSVKDIILMVGN-KKEFNLREIARPALFIPESLYANKI 294

Query: 279 FDQMMQKRLQLSVVVDEYGSVQGLLTLEDIFEHLLGEEIIDEAD 322
            +   + + +  VVV+EYGS +G++TL D+ E + G +I++E D
Sbjct: 295 LELFKKNKNKFGVVVNEYGSTEGIITLHDLTESIFG-DILEEDD 337