Pairwise Alignments

Query, 352 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 423 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  109 bits (273), Expect = 1e-28
 Identities = 83/320 (25%), Positives = 151/320 (47%), Gaps = 10/320 (3%)

Query: 4   LAIYISVAIGVSFICSVLEAVLLSITPSYLAQLRQQGHPAANRLAGLKADIDRPLASILT 63
           L I++ V I  S   S  E  ++++    L  L   GH  A R   L    DR +  IL 
Sbjct: 9   LLIFLLVLILCSAYFSGSETAMMTLNRYRLRHLASNGHKGAIRALKLLERPDRLIGLILI 68

Query: 64  LNTIAHTIGAATAGAQAAVVFGSQWLGLFSAVLTLGILVLSEIVPKTIGATYWRELAPQA 123
            N + + + +A A      ++G   + + + VLTL +LV +E+ PKTI A     +A  +
Sbjct: 69  GNNLVNILASAIATIIGMRLWGDLGVAVATGVLTLVVLVFAEVTPKTIAALNPERIAFPS 128

Query: 124 SLVLRWM----VWALTPFVWFSEQITKRLARKVEAPKLRDEISAMAMLANENGE-FAEGE 178
           S++L  +     + +T   W +  I +    K  +         +  + +E G    +  
Sbjct: 129 SILLIGLSTIFAYVVTSVNWITTGILRLFGIKTISSSDALSQEELRTVVHEAGALIPQRH 188

Query: 179 SKMLNNLLAIQNVPVTQVMTPRPVLFRVSADLTIDEFIEQHRDTPFSRPLIYSEEKDNIV 238
            +ML ++L ++ V V  +M PR  ++ ++ +        Q   +P +R L+Y +  D+ V
Sbjct: 189 QEMLLSILDLEKVTVEDIMVPRSDIYAINVNDDFKFINRQVIQSPHTRVLVYRDTIDDAV 248

Query: 239 GFVH---RLELFKEQQNGQGNLLLGDVMRPIHVVLNTLSLPKAFDQMMQKRLQLSVVVDE 295
           GF+H    L L  ++Q  + +LL    ++ ++ +     L          + ++ +VVDE
Sbjct: 249 GFIHLRDALRLQSKEQFSKSSLL--RAVKELYFIPEGTPLNVQLANFQHNKERIGLVVDE 306

Query: 296 YGSVQGLLTLEDIFEHLLGE 315
           YG +QGL+TLEDI E ++G+
Sbjct: 307 YGDIQGLVTLEDILEEIVGD 326