Pairwise Alignments

Query, 352 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score = 87.4 bits (215), Expect = 6e-22
 Identities = 80/331 (24%), Positives = 143/331 (43%), Gaps = 20/331 (6%)

Query: 12  IGVSFICSVLEAVLLSITPSYLAQLRQQGHPAANRLAGLKADIDRPLASI-LTLNTIAHT 70
           IG S   S+ E  L +     L QL  +G   A ++  L+A        + + LN +A  
Sbjct: 14  IGASCFFSMSEIALAASRKIRLRQLADEGDSRAEKVLQLQAQPGSFFTVVQIGLNAVAIM 73

Query: 71  IGAATAGAQAAVV--FGSQWLG----------LFSAVLTLGILVLSEIVPKTIGATYWRE 118
            G     A       F S WL           L   V+T   +++++++PK I       
Sbjct: 74  GGIVGESAFRPYFYQFLSAWLSDPWLSQLSFFLSFFVVTSAFILVADLMPKRIAMAMPES 133

Query: 119 LAPQASLVLRWMVWALTPFVWFSEQITKRLARKVEAPKLR------DEISAMAMLANENG 172
           +A      + + +  L P VWF   +   + + ++ P +R      D+I A+     E G
Sbjct: 134 VALVVVGPMSFCIAILRPLVWFFNGMASGIFKLLQIPTVRNDEITPDDIYAVMNAGAEAG 193

Query: 173 EFAEGESKMLNNLLAIQNVPVTQVMTPRPVLFRVSADLTIDEFIEQHRDTPFSRPLIYSE 232
              +GE +M+ N+  +Q V VT  MT R  L       + ++   +  + P ++ L+   
Sbjct: 194 VLDKGEQQMIENVFEMQTVSVTSAMTARESLVYFLLQDSEEDIKRKIAEDPHTKFLVCDG 253

Query: 233 EKDNIVGFVHRLELFKEQQNGQG-NLLLGDVMRPIHVVLNTLSLPKAFDQMMQKRLQLSV 291
           + D + GFV   EL     NG+   L    ++    ++ +TLSL +A +     R   +V
Sbjct: 254 QLDMVKGFVDAKELLIRVINGEKITLKDNSLVHTSLIIPDTLSLSEAMEYFKNSRADFAV 313

Query: 292 VVDEYGSVQGLLTLEDIFEHLLGEEIIDEAD 322
           V++EY  V G++T  D+   ++G   + E++
Sbjct: 314 VMNEYALVVGIVTTNDLQRAVMGAWSLHESE 344