Pairwise Alignments

Query, 326 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., putative ROK-family protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  196 bits (498), Expect = 7e-55
 Identities = 118/309 (38%), Positives = 172/309 (55%), Gaps = 16/309 (5%)

Query: 32  MLIGLDIGGTKIEICVLDKQGSMLYRQRIATP-DNYSQFVDCVCSLIVDAEQ-------- 82
           M  GLDIGGTKI + + D   + + R +I TP  +Y QF+D VC+ I  A++        
Sbjct: 1   MHYGLDIGGTKIALALFDDSMACVERWQIPTPVADYGQFLDEVCAQIERADELAQQHSGV 60

Query: 83  ATQPVD----SIGIGLPGAVSPVTGLIKNANCTFLNGQDLSSDLQYRLGREVKLANDANC 138
             QP +    S+GI LPG +    G + ++N   LNG+ ++ +L  RLGR V L ND  C
Sbjct: 61  TVQPAEVSKGSVGIALPGVILS-DGTVLSSNVPCLNGRTVAQELTVRLGRPVALGNDCRC 119

Query: 139 FALSEAIDGAGKESMVVFGAILGTGCGGSIVVNRQVLVGPNAICGEWGHNPLPGYHLEQD 198
           FALSE + GAG     V G ILGTG GG + +++++++G + + GE+GH  LP   + + 
Sbjct: 120 FALSEVLLGAGVGFERVLGVILGTGLGGGVCISQKLILGAHCLAGEFGHIGLPASVIIKH 179

Query: 199 GAARY-CYCGRQNCIERFISGSGFQDSYQALTGECITASEIMKRYKQQEPEAIHCYTQLI 257
               + C CG   C E ++SG+G    YQ   G   T   +   Y+  + EAI  +   +
Sbjct: 180 QLPLFECGCGLTGCAETYVSGTGLGRLYQHFGGTADTYVWLAD-YRSGKAEAISTFDAYM 238

Query: 258 DHMARSFAGLVNVLDPDIIVLGGGLSNIDELYRDLPTATARHVFSDSAQVHFAKAVFGDS 317
           D +    AG +  LDPD +V GGG+S + E+   LP ATARH+F+ +    F  A FG +
Sbjct: 239 DALGSVLAGQILSLDPDCLVFGGGISEVKEIIAALPDATARHLFASAKLPEFRVAEFGAA 298

Query: 318 SGIRGAAWL 326
           SG+RGAA L
Sbjct: 299 SGVRGAALL 307