Pairwise Alignments

Query, 326 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., ROK (NCBI) from Rhodospirillum rubrum S1H

 Score =  265 bits (676), Expect = 1e-75
 Identities = 137/294 (46%), Positives = 182/294 (61%), Gaps = 2/294 (0%)

Query: 34  IGLDIGGTKIEICVLDKQGSMLYRQRIATPDN-YSQFVDCVCSLIVDAEQATQPVDSIGI 92
           +GLD+GGTK EI  LD +G +L R+R  +P   Y   +DC+ +L+ +AE       S+G+
Sbjct: 5   LGLDLGGTKTEIIALDDEGRILLRRRRPSPRAAYGATLDCLAALVTEAEAELGRQGSVGV 64

Query: 93  GLPGAVSPVTGLIKNANCTFLNGQDLSSDLQYRLGREVKLANDANCFALSEAIDGAGKES 152
            +PGA+SP +GL+KNAN  +LNGQ L  DL  RLGR V++ANDA+CFALSEA DGA   +
Sbjct: 65  AMPGAISPASGLVKNANSHWLNGQRLDHDLAERLGRPVRVANDADCFALSEATDGAAAGA 124

Query: 153 MVVFGAILGTGCGGSIVVNRQVLVGPNAICGEWGHNPLPGYHLEQDGAARYCYCGRQNCI 212
             VFG ILGTG G  IVVN ++L GPNAI GEWGH PLP +  + +     CYCG + C+
Sbjct: 125 SSVFGVILGTGVGAGIVVNGRLLAGPNAIAGEWGHMPLP-WPGDDERPGPDCYCGLKGCV 183

Query: 213 ERFISGSGFQDSYQALTGECITASEIMKRYKQQEPEAIHCYTQLIDHMARSFAGLVNVLD 272
           E F SG G    +Q  TG  I    ++   +  + +A     +  D +AR+ A ++N+LD
Sbjct: 184 ETFCSGPGLAADHQKSTGHAIEGPALLALAQAGDAQAQASLDRHADRLARALAVVINILD 243

Query: 273 PDIIVLGGGLSNIDELYRDLPTATARHVFSDSAQVHFAKAVFGDSSGIRGAAWL 326
           P +IVLGGGL  +  LY+ LP      VFSD           GDSSG+RGAAWL
Sbjct: 244 PQVIVLGGGLGQMPHLYQALPRLWTPWVFSDRVDTRLVAPRHGDSSGVRGAAWL 297