Pairwise Alignments

Query, 307 a.a., D-2-hydroxyacid dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., glycerate dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 77.0 bits (188), Expect = 5e-19
 Identities = 64/238 (26%), Positives = 106/238 (44%), Gaps = 17/238 (7%)

Query: 46  PMAARRLDEFPRLQWLHSAYAGVDTLMDPKLRKNY--LLTNVKGIFGHLIAEYVMGYAIQ 103
           P+ A+ L + P+L+++     G + ++D    K+   ++TNV       +A+ V  + + 
Sbjct: 54  PLDAKTLAQLPKLKYVGVLATGTN-VVDIAAAKDLGIVVTNVPAYGHDAVAQMVFAHILH 112

Query: 104 YQRDFRLYQTQQAERLWQP--------RPYSSLANQTLVILGTGSIGSHLAHVAKQFGLR 155
           + +    +    A   W           P  SL  +TL ++G G IG  +A +A  FG++
Sbjct: 113 HTQAVAAHHQAVAAGQWTSCSDFCFTLMPLQSLKGKTLGLIGYGDIGQQVAKLALAFGMK 172

Query: 156 VVGVNRTGIPAKEGHFDATYHISELPAALMRADLLVNTLPNTPATEGLLNQENLRHCH-Q 214
           V+   RT    +  H       +     L  +D+L    P TP T  L+N + L     Q
Sbjct: 173 VLVNTRT----EPAHLPQGVSWTSRDKVLKESDILSLHCPLTPETNELINAQTLELMKPQ 228

Query: 215 ALLFNVGRGKTLVEQGLPDLIAAGHIRHAFLDVFIKEPLAQDHPFWDNPAITITPHIA 272
           ALL N  RG  + E  L   +  G +  A +DV   EP + D+P    P I+ +PH A
Sbjct: 229 ALLINTARGGLIDEAALAVALTQGRV-FAGVDVLSTEPPSMDNPLLSAPNISTSPHNA 285