Pairwise Alignments

Query, 307 a.a., D-2-hydroxyacid dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., D-isomer specific 2-hydroxyacid dehydrogenase family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  255 bits (651), Expect = 1e-72
 Identities = 141/311 (45%), Positives = 193/311 (62%), Gaps = 10/311 (3%)

Query: 5   HQLYILTEHDEHYREQILERQLEGLALTEDR----AKATILLAAPPMAARRLDEFPRLQW 60
           H+L +LT+ +E YR+ I  +QL GL L +D     ++A I LA P +AA  L    +LQW
Sbjct: 3   HKLLLLTKVNEQYRQLIEAQQLPGLELLDDNPANISQANIWLAEPKLAAPLLPHAKQLQW 62

Query: 61  LHSAYAGVDTLMDPKLRKNYLLTNVKGIFGHLIAEYVMGYAIQYQRDFRLYQTQQAERLW 120
           L S++AG+D LM P+ RK+Y LTN+KGIFG L++EY+ GY + + R    YQ QQ ++ W
Sbjct: 63  LQSSFAGIDALMGPRARKDYQLTNIKGIFGPLMSEYLFGYLLAHVRGHHFYQQQQQQKYW 122

Query: 121 QPRP---YSSLANQTLVILGTGSIGSHLAHVAKQFGLRVVGVNRTGIPAKEGHFDATYHI 177
           Q +    ++SL    L+ILGTGSI  H+   AK FG+ V GVNR+     EG FD    +
Sbjct: 123 QVQGAMRHTSLQGMRLLILGTGSIAQHVTKTAKHFGMHVTGVNRSAREV-EG-FDVILPL 180

Query: 178 SELPAALMRADLLVNTLPNTPATEGLLNQENLRHCH-QALLFNVGRGKTLVEQGLPDLIA 236
           S+L  AL ++D++ N LP+TP T  LLN+  L      A+L NVGRG  L    L   + 
Sbjct: 181 SQLAQALGQSDVVTNLLPSTPETRQLLNESMLAKLKADAILMNVGRGDALDLDALNAQLI 240

Query: 237 AGHIRHAFLDVFIKEPLAQDHPFWDNPAITITPHIAAVSFPEQVVDIFADNYQRWCDNLP 296
           A   + A LDVF++EPL   HP W+     ITPHI+A S PEQ+V IF DNY+R+    P
Sbjct: 241 AHPAQQAILDVFMQEPLPATHPIWERTNAIITPHISAPSHPEQIVSIFCDNYRRYIAAKP 300

Query: 297 LRNQIDFEKGY 307
           L+NQ+DF +GY
Sbjct: 301 LQNQVDFTQGY 311