Pairwise Alignments

Query, 412 a.a., mechanosensitive ion channel family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., Small-conductance mechanosensitive channel from Pseudomonas stutzeri RCH2

 Score =  357 bits (917), Expect = e-103
 Identities = 195/410 (47%), Positives = 268/410 (65%), Gaps = 9/410 (2%)

Query: 1   MLETLTLWLQKFDIEIERVIQLAEALGLIAA--ISIAIHLVLHRGVLLWLKRHTHHEQSV 58
           M + L  WL       E    LA A  + AA   +  +  +L RG L  L +HT      
Sbjct: 1   MSDDLAGWLDWLRAHAELQTLLASATLIFAAWLSNWVVKRILVRG-LYRLLQHTRE---- 55

Query: 59  WRNALFKEHLFSRVALLIQGVVIAVQTQLWLSPNTFAYDVLHTLTSLWIVVFGMLATYSV 118
             N L    +  R++ ++  +V+++           A  V+  +   +IV+   LA  +V
Sbjct: 56  --NKLQDFGVIKRLSNIVPALVLSIGVTTVPGLPEAAVTVVQNVCGGFIVLTIALALGAV 113

Query: 119 LNVLELLISRTQVGKNLPTRGILQSIKLIVFIIAALFFTSILIGKSPVILLSGLGAMTAV 178
           L+++ L+  R    +  P +G LQ +K++V+ IA +   + LI +SP+ILLSGLGAM AV
Sbjct: 114 LDIVNLIYQRRPDSRLHPIKGYLQVVKIVVYAIATILIIATLIDRSPLILLSGLGAMAAV 173

Query: 179 FMLVFKDPILGLVAGVQLSANKMLSVGDWLEMPKYGADGSVIDISLTTVKVQNWDKTITT 238
            ML+F+D +L LVA VQ+++N ++ VGDW+EMP+  ADG VIDI+L TVK+QNWDKTIT+
Sbjct: 174 LMLIFQDTLLSLVASVQITSNDLIRVGDWVEMPQLNADGDVIDIALHTVKIQNWDKTITS 233

Query: 239 IPSYALISDSFKNWKGMQESGGRRIKRSILIDATSVHFLTEEEKQALKKAQLLEPYLVEK 298
           IP+   ISDSFKNW+GMQESGGRRIKRS+ +D  SVHFL+ EE + L +  LL+ YL EK
Sbjct: 234 IPTKRFISDSFKNWRGMQESGGRRIKRSLYLDQQSVHFLSREECERLHRFNLLDEYLTEK 293

Query: 299 EQEISSYNQQKHWDLACRINGRRLTNIGSFRAYLERYLRTHPNIHQDMTLMVRQLAPTHD 358
            +EI ++N +        +N RR+TNIGSFRAY+ERYLR+H  IHQ+MTL+VRQL+PT D
Sbjct: 294 TREIEAWNAKLEERGKEPVNTRRITNIGSFRAYVERYLRSHGGIHQNMTLIVRQLSPTAD 353

Query: 359 GISLEVYCFTSTTVWVEYERIQSDIFDHIYAVLPEFDLRVSQAPTGNDFR 408
           G+ LE+YCFT+T  W +YE IQSDIFDH+ A+LPEF LRV Q P+G D R
Sbjct: 354 GLPLEIYCFTNTVAWTQYEAIQSDIFDHLLAILPEFGLRVFQHPSGADIR 403