Pairwise Alignments

Query, 412 a.a., mechanosensitive ion channel family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., putative small-conductance mechanosensitive channel (RefSeq) from Shewanella amazonensis SB2B

 Score =  362 bits (929), Expect = e-104
 Identities = 179/386 (46%), Positives = 259/386 (67%), Gaps = 1/386 (0%)

Query: 26  LGLIAAISIAIHLVLHRGVLLWLKRHTHHEQSVWRNALFKEHLFSRVALLIQGVVIAVQT 85
           LG+   I+   +L++ RGV+  +          W +   K  +  ++++L+  +V+ +  
Sbjct: 5   LGVSFVIAAVAYLIVRRGVVKAMNLVIQRSSVTWDDVFMKYKVLEKLSMLVPAMVLDLLL 64

Query: 86  QLWLSPNTFAYDVLHTLTSLWIVVFGMLATYSVLNVLELLISRTQVGKNLPTRGILQSIK 145
            + L+ +  A ++   L ++ +V+  + A YS L+ +  +     + + LP + ++Q IK
Sbjct: 65  PIVLAEHKLAANLADRLINVALVILLIRAIYSALDAVNEIAEIRDISRRLPVKSVVQLIK 124

Query: 146 LIVFIIAALFFTSILIGKSPVILLSGLGAMTAVFMLVFKDPILGLVAGVQLSANKMLSVG 205
           L +F +  +   S+L  +SPVI LSGLG  T + MLVFKD ILG VAG+QL+AN+M+S G
Sbjct: 125 LFLFFVGVIIGISVLADQSPVIFLSGLGVATGLVMLVFKDTILGFVAGIQLAANRMVSKG 184

Query: 206 DWLEMPKYGADGSVIDISLTTVKVQNWDKTITTIPSYALISDSFKNWKGMQESGGRRIKR 265
           DW++M KYGADG+V ++SLTTVKV+NWD T+T IP+YAL+SD+F+NW+GM ESGGRRIKR
Sbjct: 185 DWIQMDKYGADGAVEEVSLTTVKVRNWDNTLTMIPAYALVSDAFRNWRGMSESGGRRIKR 244

Query: 266 SILIDATSVHFLTEEEKQALKKAQLLEPYLVEKEQEISSYNQQKHWDLACRINGRRLTNI 325
           ++ ID  S+ FLTEE++  L +   L+ YL  K  E++  N     D+   +NGRRLTN+
Sbjct: 245 ALNIDINSIRFLTEEDRVRLSRINYLKDYLPRKIIEVTEANAGIA-DIDVPVNGRRLTNV 303

Query: 326 GSFRAYLERYLRTHPNIHQDMTLMVRQLAPTHDGISLEVYCFTSTTVWVEYERIQSDIFD 385
           G+FRAYL  YLR H  +H+DMTLMVRQLAPT +G+ LE+Y FT+ T WV YE IQ+DIFD
Sbjct: 304 GTFRAYLTEYLRHHDKVHKDMTLMVRQLAPTTEGLPLELYIFTNDTRWVVYEGIQADIFD 363

Query: 386 HIYAVLPEFDLRVSQAPTGNDFRALR 411
           HI+A+LPEF L   Q PTG D R+LR
Sbjct: 364 HIFAILPEFGLTAFQNPTGEDIRSLR 389