Pairwise Alignments

Query, 412 a.a., mechanosensitive ion channel family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

 Score =  367 bits (941), Expect = e-106
 Identities = 189/410 (46%), Positives = 272/410 (66%), Gaps = 4/410 (0%)

Query: 5   LTLWLQKFDIEIERVIQLAEALGLIAAISIAI--HLVLHRGVLLWLKRHTHHEQSVWRNA 62
           ++LWL  F I+      ++  + + A + IA   ++V+ RGV+  +       +  W + 
Sbjct: 9   VSLWLTHFGIDSPSD-GVSTGVMVFACLLIAFIGYVVVKRGVVSTMNIVIQRSKVRWDDI 67

Query: 63  LFKEHLFSRVALLIQGVVIAVQTQLWLSPNTFAYDVLHTLTSLWIVVFGMLATYSVLNVL 122
             +  +  ++A L+  +++ +   L L  +     +   L  + IV+  + A YSVL+  
Sbjct: 68  FMQHRVLEKLAKLVPALILNILLPLALVEHPLLSSLADRLLDVAIVILFVRAVYSVLDAG 127

Query: 123 ELLISRTQVGKNLPTRGILQSIKLIVFIIAALFFTSILIGKSPVILLSGLGAMTAVFMLV 182
             +    Q+ + LP +  +Q +KL +F +A +   S+L  +SPV  LSGLG  T + MLV
Sbjct: 128 NEIADVNQISRRLPIKSFVQLLKLFMFFVAIVISISVLAEQSPVYFLSGLGVATGLVMLV 187

Query: 183 FKDPILGLVAGVQLSANKMLSVGDWLEMPKYGADGSVIDISLTTVKVQNWDKTITTIPSY 242
           FKD ILG VAG+QL+AN+M+S GDW++M KYGADG+V ++SLTTVKVQNWDKTIT IP+Y
Sbjct: 188 FKDTILGFVAGIQLAANRMVSPGDWIQMDKYGADGAVEEVSLTTVKVQNWDKTITMIPAY 247

Query: 243 ALISDSFKNWKGMQESGGRRIKRSILIDATSVHFLTEEEKQALKKAQLLEPYLVEKEQEI 302
           AL+SD+FKNW+GM ESGGRRIKR++ ID  S+ FL++E+ + L K  LL+ YL  KE EI
Sbjct: 248 ALVSDAFKNWRGMSESGGRRIKRAVNIDIDSIAFLSDEQLKRLGKINLLKEYLARKEVEI 307

Query: 303 SSYNQQKHWDLACRINGRRLTNIGSFRAYLERYLRTHPNIHQDMTLMVRQLAPTHDGISL 362
           + +N  K  D    +N R LTN+G+FRAYL  Y+R HP +HQ+MTL+VRQLAPT +G+ +
Sbjct: 308 AEFN-AKIQDGDMPVNSRNLTNVGTFRAYLLEYMRKHPKVHQEMTLLVRQLAPTTEGLPI 366

Query: 363 EVYCFTSTTVWVEYERIQSDIFDHIYAVLPEFDLRVSQAPTGNDFRALRG 412
           E+Y FT+ T W  YE IQ+DIFDHIYA+LP+F+LR  QAPTG D R+L+G
Sbjct: 367 EIYIFTNDTRWAFYEDIQADIFDHIYAILPQFNLRAFQAPTGADVRSLKG 416