Pairwise Alignments

Query, 412 a.a., mechanosensitive ion channel family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 404 a.a., small mechanosensitive ion channel protein MscS from Burkholderia phytofirmans PsJN

 Score =  224 bits (571), Expect = 4e-63
 Identities = 131/393 (33%), Positives = 209/393 (53%), Gaps = 24/393 (6%)

Query: 13  DIEIERVIQLAEALGLIAAISIAIHLVLHRGVLLWLKRHTHHEQSVWRNALFKEHLFSRV 72
           D E   ++ +   L  I   S   + V    +LL + R    E+  W  A  +  +F R+
Sbjct: 22  DSEFVAILLVVALLVAILLASTICYYVTRSIMLLIVSRLARQERHKWLQAAERHKVFHRL 81

Query: 73  ALLIQGVVIAVQTQLWLSPNTFAYDV-----LHTLTSLWIVVFGMLATYSVLNVLELLIS 127
           A L+   ++     L LS  TF         L  L + ++V   + A  + L+ +    S
Sbjct: 82  APLVPAAIVYAAGPL-LSGITFPLIAALGHPLSVLAACYMVYTVLRAALAFLDSVSERYS 140

Query: 128 RTQVGKNLPTRGILQSIKLIVFIIAALFFTSILIGKSPVILLSGLGAMTAVFMLVFKDPI 187
                   P +  LQ   +++++IA +   S+L+ +SP   L+GL AMTA+ +++F++ +
Sbjct: 141 HFPSASERPIKSFLQIATIVLYVIALIAVISVLLERSPAYFLTGLSAMTALLIIIFRETL 200

Query: 188 LGLVAGVQLSANKMLSVGDWLEMPKYGADGSVIDISLTTVKVQNWDKTITTIPSYALISD 247
           LG VA +QL+A  ML VGDW+E+P + ADG+VIDI+L T+KVQN+D +I  +PSY L++ 
Sbjct: 201 LGFVASIQLAAYDMLRVGDWIEVPGFVADGTVIDIALNTIKVQNFDNSIVMVPSYVLLTS 260

Query: 248 SFKNWKGMQESGGRRIKRSILIDATSVHFLTEEEKQALKKAQLLEPYLVEKEQEISSYNQ 307
             KNW+GM ESGGRR+K SI  DA +V F  E          LL     + +  ++++  
Sbjct: 261 GVKNWRGMTESGGRRVKHSIHFDADTVRFPDE---------ALLARLHSDIDPPLTAF-- 309

Query: 308 QKHWDLACRINGRRLTNIGSFRAYLERYLRTHPNIHQDMTLMVRQLAPTHDGISLEVYCF 367
                       +R TN+G +R YL  + R HP I  DM +++RQ+  +   ++LE++ +
Sbjct: 310 -------APAGTQRRTNLGLYRLYLSAHFRAHPAIRHDMPVVIRQVQSSQPVVALEIFLY 362

Query: 368 TSTTVWVEYERIQSDIFDHIYAVLPEFDLRVSQ 400
              T W  YE +QSD+ DH Y ++P F LR  Q
Sbjct: 363 VDETSWEPYEILQSDMLDHAYGLVPLFGLRCWQ 395