Pairwise Alignments

Query, 412 a.a., mechanosensitive ion channel family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 422 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella sp. ANA-3

 Score =  373 bits (957), Expect = e-108
 Identities = 183/406 (45%), Positives = 270/406 (66%), Gaps = 3/406 (0%)

Query: 8   WLQKFDIEIERVIQLAEALGLIAAISIAI--HLVLHRGVLLWLKRHTHHEQSVWRNALFK 65
           WL    I+ +    ++ ++ L+A + +A   + ++ RGV+  +       ++ W +   +
Sbjct: 12  WLSSVGIDSQPSDSISTSIMLLACVLVAAIAYFIMRRGVIRAVNMVILRSKATWDDVFMR 71

Query: 66  EHLFSRVALLIQGVVIAVQTQLWLSPNTFAYDVLHTLTSLWIVVFGMLATYSVLNVLELL 125
             +  ++A+L+  +V+ +   + L+ +     ++  L S+W+V+  + A Y+ L+ +  +
Sbjct: 72  YKVLEKLAMLVPAIVLNLLVPITLTEHPVLSSLVDRLLSIWLVILMIRAIYAGLDAVNEI 131

Query: 126 ISRTQVGKNLPTRGILQSIKLIVFIIAALFFTSILIGKSPVILLSGLGAMTAVFMLVFKD 185
                V + LP +  +Q IKL +F +  +   S+L  +SPV  LSGLG  T   MLVF+D
Sbjct: 132 SDVNLVSRRLPVKSFVQLIKLFLFFVGLIVSISVLADQSPVYFLSGLGVATGFVMLVFRD 191

Query: 186 PILGLVAGVQLSANKMLSVGDWLEMPKYGADGSVIDISLTTVKVQNWDKTITTIPSYALI 245
            ILG VAG+QL+AN+M+S GDW++M KYGADG+V ++SLTTVKV+NWDKTIT IP+YAL+
Sbjct: 192 TILGFVAGIQLAANRMVSKGDWIQMDKYGADGAVEEVSLTTVKVRNWDKTITMIPAYALV 251

Query: 246 SDSFKNWKGMQESGGRRIKRSILIDATSVHFLTEEEKQALKKAQLLEPYLVEKEQEISSY 305
           SD+F+NW+GM ESGGRRIKR++ ID  S+ FL+EEE+  L K   L+ Y   K  EI   
Sbjct: 252 SDAFRNWRGMSESGGRRIKRAVNIDINSIKFLSEEERNRLSKINCLKEYFPAKISEIQES 311

Query: 306 NQQKHWDLACRINGRRLTNIGSFRAYLERYLRTHPNIHQDMTLMVRQLAPTHDGISLEVY 365
           N  K  DL  ++NGR LTN+G+FRAYL+ YL+ H  +H+DMTLMVRQLAPT +G+ +E+Y
Sbjct: 312 N-AKVSDLDMKVNGRHLTNVGTFRAYLQEYLQRHDKVHKDMTLMVRQLAPTTEGLPIEIY 370

Query: 366 CFTSTTVWVEYERIQSDIFDHIYAVLPEFDLRVSQAPTGNDFRALR 411
            FT+ T W  YE IQ+DIFDHI+AVLPEF L+  QAPTGND R+L+
Sbjct: 371 IFTNDTRWAFYEAIQADIFDHIFAVLPEFGLQAFQAPTGNDIRSLK 416